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Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency
Independent component analysis (ICA) is increasingly used to analyze patterns of spontaneous activity in brain imaging. However, there are hardly any methods for answering the fundamental question: are the obtained components statistically significant? Most methods considering the significance of co...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605514/ https://www.ncbi.nlm.nih.gov/pubmed/23525229 http://dx.doi.org/10.3389/fnhum.2013.00094 |
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author | Hyvärinen, Aapo Ramkumar, Pavan |
author_facet | Hyvärinen, Aapo Ramkumar, Pavan |
author_sort | Hyvärinen, Aapo |
collection | PubMed |
description | Independent component analysis (ICA) is increasingly used to analyze patterns of spontaneous activity in brain imaging. However, there are hardly any methods for answering the fundamental question: are the obtained components statistically significant? Most methods considering the significance of components either consider group-differences or use arbitrary thresholds with weak statistical justification. In previous work, we proposed a statistically principled method for testing if the coefficients in the mixing matrix are similar in different subjects or sessions. In many applications of ICA, however, we would like to test the reliability of the independent components themselves and not the mixing coefficients. Here, we develop a test for such an inter-subject consistency by extending our previous theory. The test is applicable, for example, to the spatial activity patterns obtained by spatial ICA in resting-state fMRI. We further improve both this and the previously proposed testing method by introducing a new way of correcting for multiple testing, new variants of the clustering method, and a computational approximation which greatly reduces the memory and computation required. |
format | Online Article Text |
id | pubmed-3605514 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36055142013-03-22 Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency Hyvärinen, Aapo Ramkumar, Pavan Front Hum Neurosci Neuroscience Independent component analysis (ICA) is increasingly used to analyze patterns of spontaneous activity in brain imaging. However, there are hardly any methods for answering the fundamental question: are the obtained components statistically significant? Most methods considering the significance of components either consider group-differences or use arbitrary thresholds with weak statistical justification. In previous work, we proposed a statistically principled method for testing if the coefficients in the mixing matrix are similar in different subjects or sessions. In many applications of ICA, however, we would like to test the reliability of the independent components themselves and not the mixing coefficients. Here, we develop a test for such an inter-subject consistency by extending our previous theory. The test is applicable, for example, to the spatial activity patterns obtained by spatial ICA in resting-state fMRI. We further improve both this and the previously proposed testing method by introducing a new way of correcting for multiple testing, new variants of the clustering method, and a computational approximation which greatly reduces the memory and computation required. Frontiers Media S.A. 2013-03-22 /pmc/articles/PMC3605514/ /pubmed/23525229 http://dx.doi.org/10.3389/fnhum.2013.00094 Text en Copyright © 2013 Hyvärinen and Ramkumar. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Neuroscience Hyvärinen, Aapo Ramkumar, Pavan Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title | Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title_full | Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title_fullStr | Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title_full_unstemmed | Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title_short | Testing Independent Component Patterns by Inter-Subject or Inter-Session Consistency |
title_sort | testing independent component patterns by inter-subject or inter-session consistency |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605514/ https://www.ncbi.nlm.nih.gov/pubmed/23525229 http://dx.doi.org/10.3389/fnhum.2013.00094 |
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