Cargando…

DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities

Stylophora pistillata is a widely used coral “lab-rat” species with highly variable morphology and a broad biogeographic range (Red Sea to western central Pacific). Here we show, by analysing Cytochorme Oxidase I sequences, from 241 samples across this range, that this taxon in fact comprises four d...

Descripción completa

Detalles Bibliográficos
Autores principales: Keshavmurthy, Shashank, Yang, Sung-Yin, Alamaru, Ada, Chuang, Yao-Yang, Pichon, Michel, Obura, David, Fontana, Silvia, De Palmas, Stephane, Stefani, Fabrizio, Benzoni, Francesca, MacDonald, Angus, Noreen, Annika M. E., Chen, Chienshun, Wallace, Carden C., Pillay, Ruby Moothein, Denis, Vianney, Amri, Affendi Yang, Reimer, James D., Mezaki, Takuma, Sheppard, Charles, Loya, Yossi, Abelson, Avidor, Mohammed, Mohammed Suleiman, Baker, Andrew C., Mostafavi, Pargol Ghavam, Suharsono, Budiyanto A., Chen, Chaolun Allen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605610/
https://www.ncbi.nlm.nih.gov/pubmed/23519209
http://dx.doi.org/10.1038/srep01520
_version_ 1782263923450314752
author Keshavmurthy, Shashank
Yang, Sung-Yin
Alamaru, Ada
Chuang, Yao-Yang
Pichon, Michel
Obura, David
Fontana, Silvia
De Palmas, Stephane
Stefani, Fabrizio
Benzoni, Francesca
MacDonald, Angus
Noreen, Annika M. E.
Chen, Chienshun
Wallace, Carden C.
Pillay, Ruby Moothein
Denis, Vianney
Amri, Affendi Yang
Reimer, James D.
Mezaki, Takuma
Sheppard, Charles
Loya, Yossi
Abelson, Avidor
Mohammed, Mohammed Suleiman
Baker, Andrew C.
Mostafavi, Pargol Ghavam
Suharsono, Budiyanto A.
Chen, Chaolun Allen
author_facet Keshavmurthy, Shashank
Yang, Sung-Yin
Alamaru, Ada
Chuang, Yao-Yang
Pichon, Michel
Obura, David
Fontana, Silvia
De Palmas, Stephane
Stefani, Fabrizio
Benzoni, Francesca
MacDonald, Angus
Noreen, Annika M. E.
Chen, Chienshun
Wallace, Carden C.
Pillay, Ruby Moothein
Denis, Vianney
Amri, Affendi Yang
Reimer, James D.
Mezaki, Takuma
Sheppard, Charles
Loya, Yossi
Abelson, Avidor
Mohammed, Mohammed Suleiman
Baker, Andrew C.
Mostafavi, Pargol Ghavam
Suharsono, Budiyanto A.
Chen, Chaolun Allen
author_sort Keshavmurthy, Shashank
collection PubMed
description Stylophora pistillata is a widely used coral “lab-rat” species with highly variable morphology and a broad biogeographic range (Red Sea to western central Pacific). Here we show, by analysing Cytochorme Oxidase I sequences, from 241 samples across this range, that this taxon in fact comprises four deeply divergent clades corresponding to the Pacific-Western Australia, Chagos-Madagascar-South Africa, Gulf of Aden-Zanzibar-Madagascar, and Red Sea-Persian/Arabian Gulf-Kenya. On the basis of the fossil record of Stylophora, these four clades diverged from one another 51.5-29.6 Mya, i.e., long before the closure of the Tethyan connection between the tropical Indo-West Pacific and Atlantic in the early Miocene (16–24 Mya) and should be recognised as four distinct species. These findings have implications for comparative ecological and/or physiological studies carried out using Stylophora pistillata as a model species, and highlight the fact that phenotypic plasticity, thought to be common in scleractinian corals, can mask significant genetic variation.
format Online
Article
Text
id pubmed-3605610
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-36056102013-03-22 DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities Keshavmurthy, Shashank Yang, Sung-Yin Alamaru, Ada Chuang, Yao-Yang Pichon, Michel Obura, David Fontana, Silvia De Palmas, Stephane Stefani, Fabrizio Benzoni, Francesca MacDonald, Angus Noreen, Annika M. E. Chen, Chienshun Wallace, Carden C. Pillay, Ruby Moothein Denis, Vianney Amri, Affendi Yang Reimer, James D. Mezaki, Takuma Sheppard, Charles Loya, Yossi Abelson, Avidor Mohammed, Mohammed Suleiman Baker, Andrew C. Mostafavi, Pargol Ghavam Suharsono, Budiyanto A. Chen, Chaolun Allen Sci Rep Article Stylophora pistillata is a widely used coral “lab-rat” species with highly variable morphology and a broad biogeographic range (Red Sea to western central Pacific). Here we show, by analysing Cytochorme Oxidase I sequences, from 241 samples across this range, that this taxon in fact comprises four deeply divergent clades corresponding to the Pacific-Western Australia, Chagos-Madagascar-South Africa, Gulf of Aden-Zanzibar-Madagascar, and Red Sea-Persian/Arabian Gulf-Kenya. On the basis of the fossil record of Stylophora, these four clades diverged from one another 51.5-29.6 Mya, i.e., long before the closure of the Tethyan connection between the tropical Indo-West Pacific and Atlantic in the early Miocene (16–24 Mya) and should be recognised as four distinct species. These findings have implications for comparative ecological and/or physiological studies carried out using Stylophora pistillata as a model species, and highlight the fact that phenotypic plasticity, thought to be common in scleractinian corals, can mask significant genetic variation. Nature Publishing Group 2013-03-22 /pmc/articles/PMC3605610/ /pubmed/23519209 http://dx.doi.org/10.1038/srep01520 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Keshavmurthy, Shashank
Yang, Sung-Yin
Alamaru, Ada
Chuang, Yao-Yang
Pichon, Michel
Obura, David
Fontana, Silvia
De Palmas, Stephane
Stefani, Fabrizio
Benzoni, Francesca
MacDonald, Angus
Noreen, Annika M. E.
Chen, Chienshun
Wallace, Carden C.
Pillay, Ruby Moothein
Denis, Vianney
Amri, Affendi Yang
Reimer, James D.
Mezaki, Takuma
Sheppard, Charles
Loya, Yossi
Abelson, Avidor
Mohammed, Mohammed Suleiman
Baker, Andrew C.
Mostafavi, Pargol Ghavam
Suharsono, Budiyanto A.
Chen, Chaolun Allen
DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title_full DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title_fullStr DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title_full_unstemmed DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title_short DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
title_sort dna barcoding reveals the coral “laboratory-rat”, stylophora pistillata encompasses multiple identities
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3605610/
https://www.ncbi.nlm.nih.gov/pubmed/23519209
http://dx.doi.org/10.1038/srep01520
work_keys_str_mv AT keshavmurthyshashank dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT yangsungyin dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT alamaruada dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT chuangyaoyang dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT pichonmichel dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT oburadavid dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT fontanasilvia dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT depalmasstephane dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT stefanifabrizio dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT benzonifrancesca dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT macdonaldangus dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT noreenannikame dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT chenchienshun dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT wallacecardenc dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT pillayrubymoothein dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT denisvianney dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT amriaffendiyang dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT reimerjamesd dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT mezakitakuma dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT sheppardcharles dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT loyayossi dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT abelsonavidor dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT mohammedmohammedsuleiman dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT bakerandrewc dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT mostafavipargolghavam dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT suharsonobudiyantoa dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities
AT chenchaolunallen dnabarcodingrevealsthecorallaboratoryratstylophorapistillataencompassesmultipleidentities