Cargando…
Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population
OBJECTIVE: Colorectal cancer (CRC) development involves underlying modifications at genetic/epigenetic level. This study evaluated the role of Kras gene mutation and RASSF1A, FHIT and MGMT gene promoter hypermethylation together/independently in sporadic CRC in Indian population and correlation with...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3616004/ https://www.ncbi.nlm.nih.gov/pubmed/23573237 http://dx.doi.org/10.1371/journal.pone.0060142 |
_version_ | 1782265080675565568 |
---|---|
author | Sinha, Rupal Hussain, Showket Mehrotra, Ravi Kumar, R. Suresh Kumar, Kapil Pande, Pankaj Doval, Dinesh Chandra Basir, Seemi Farhat Bharadwaj, Mausumi |
author_facet | Sinha, Rupal Hussain, Showket Mehrotra, Ravi Kumar, R. Suresh Kumar, Kapil Pande, Pankaj Doval, Dinesh Chandra Basir, Seemi Farhat Bharadwaj, Mausumi |
author_sort | Sinha, Rupal |
collection | PubMed |
description | OBJECTIVE: Colorectal cancer (CRC) development involves underlying modifications at genetic/epigenetic level. This study evaluated the role of Kras gene mutation and RASSF1A, FHIT and MGMT gene promoter hypermethylation together/independently in sporadic CRC in Indian population and correlation with clinicopathological variables of the disease. METHODS: One hundred and twenty four consecutive surgically resected tissues (62 tumor and equal number of normal adjacent controls) of primary sporadic CRC were included and patient details including demographic characteristics, lifestyle/food or drinking habits, clinical and histopathological profiles were recorded. Polymerase chain reaction - Restriction fragment length polymorphism and direct sequencing for Kras gene mutation and Methylation Specific-PCR for RASSF1A, FHIT and MGMT genes was performed. RESULTS: Kras gene mutation at codon 12 & 13 and methylated RASSF1A, FHIT and MGMT gene was observed in 47%, 19%, 47%, 37% and 47% cases, respectively. Alcohol intake and smoking were significantly associated with presence of Kras mutation (codon 12) and MGMT methylation (p-value <0.049). Tumor stage and metastasis correlated with presence of mutant Kras codon 12 (p-values 0.018, 0.044) and methylated RASSF1A (p-values 0.034, 0.044), FHIT (p-values 0.001, 0.047) and MGMT (p-values 0.018, 0.044) genes. Combinatorial effect of gene mutation/methylation was also observed (p-value <0.025). Overall, tumor stage 3, moderately differentiated tumors, presence of lymphatic invasion and absence of metastasis was more frequently observed in tumors with mutated Kras and/or methylated RASSF1A, FHIT and MGMT genes. CONCLUSION: Synergistic interrelationship between these genes in sporadic CRC may be used as diagnostic/prognostic markers in assessing the overall pathological status of CRC. |
format | Online Article Text |
id | pubmed-3616004 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-36160042013-04-09 Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population Sinha, Rupal Hussain, Showket Mehrotra, Ravi Kumar, R. Suresh Kumar, Kapil Pande, Pankaj Doval, Dinesh Chandra Basir, Seemi Farhat Bharadwaj, Mausumi PLoS One Research Article OBJECTIVE: Colorectal cancer (CRC) development involves underlying modifications at genetic/epigenetic level. This study evaluated the role of Kras gene mutation and RASSF1A, FHIT and MGMT gene promoter hypermethylation together/independently in sporadic CRC in Indian population and correlation with clinicopathological variables of the disease. METHODS: One hundred and twenty four consecutive surgically resected tissues (62 tumor and equal number of normal adjacent controls) of primary sporadic CRC were included and patient details including demographic characteristics, lifestyle/food or drinking habits, clinical and histopathological profiles were recorded. Polymerase chain reaction - Restriction fragment length polymorphism and direct sequencing for Kras gene mutation and Methylation Specific-PCR for RASSF1A, FHIT and MGMT genes was performed. RESULTS: Kras gene mutation at codon 12 & 13 and methylated RASSF1A, FHIT and MGMT gene was observed in 47%, 19%, 47%, 37% and 47% cases, respectively. Alcohol intake and smoking were significantly associated with presence of Kras mutation (codon 12) and MGMT methylation (p-value <0.049). Tumor stage and metastasis correlated with presence of mutant Kras codon 12 (p-values 0.018, 0.044) and methylated RASSF1A (p-values 0.034, 0.044), FHIT (p-values 0.001, 0.047) and MGMT (p-values 0.018, 0.044) genes. Combinatorial effect of gene mutation/methylation was also observed (p-value <0.025). Overall, tumor stage 3, moderately differentiated tumors, presence of lymphatic invasion and absence of metastasis was more frequently observed in tumors with mutated Kras and/or methylated RASSF1A, FHIT and MGMT genes. CONCLUSION: Synergistic interrelationship between these genes in sporadic CRC may be used as diagnostic/prognostic markers in assessing the overall pathological status of CRC. Public Library of Science 2013-04-03 /pmc/articles/PMC3616004/ /pubmed/23573237 http://dx.doi.org/10.1371/journal.pone.0060142 Text en © 2013 Sinha et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sinha, Rupal Hussain, Showket Mehrotra, Ravi Kumar, R. Suresh Kumar, Kapil Pande, Pankaj Doval, Dinesh Chandra Basir, Seemi Farhat Bharadwaj, Mausumi Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title | Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title_full | Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title_fullStr | Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title_full_unstemmed | Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title_short | Kras Gene Mutation and RASSF1A, FHIT and MGMT Gene Promoter Hypermethylation: Indicators of Tumor Staging and Metastasis in Adenocarcinomatous Sporadic Colorectal Cancer in Indian Population |
title_sort | kras gene mutation and rassf1a, fhit and mgmt gene promoter hypermethylation: indicators of tumor staging and metastasis in adenocarcinomatous sporadic colorectal cancer in indian population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3616004/ https://www.ncbi.nlm.nih.gov/pubmed/23573237 http://dx.doi.org/10.1371/journal.pone.0060142 |
work_keys_str_mv | AT sinharupal krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT hussainshowket krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT mehrotraravi krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT kumarrsuresh krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT kumarkapil krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT pandepankaj krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT dovaldineshchandra krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT basirseemifarhat krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation AT bharadwajmausumi krasgenemutationandrassf1afhitandmgmtgenepromoterhypermethylationindicatorsoftumorstagingandmetastasisinadenocarcinomatoussporadiccolorectalcancerinindianpopulation |