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Band selection in spectral imaging for non-invasive melanoma diagnosis
A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The a...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Optical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617713/ https://www.ncbi.nlm.nih.gov/pubmed/23577286 http://dx.doi.org/10.1364/BOE.4.000514 |
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author | Quinzán, Ianisse Sotoca, José M. Latorre-Carmona, Pedro Pla, Filiberto García-Sevilla, Pedro Boldó, Enrique |
author_facet | Quinzán, Ianisse Sotoca, José M. Latorre-Carmona, Pedro Pla, Filiberto García-Sevilla, Pedro Boldó, Enrique |
author_sort | Quinzán, Ianisse |
collection | PubMed |
description | A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The aim is to improve classification rate and help to identify those spectral bands that have a more important role in melanoma detection. All the processing steps were designed taking into account the low number of samples in the dataset, situation that is quite common in medical cases. The training/test sets are built using a Leave-One-Out strategy. SMOTE is applied in order to deal with the imbalance problem, together with the Qualified Majority Voting scheme (QMV). Support Vector Machines (SVM) is the classification method applied over each balanced set. Results indicate that all melanoma lesions are correctly classified, using a low number of bands, reaching 100% sensitivity and 72% specificity when considering nine (out of a total of 55) spectral bands. |
format | Online Article Text |
id | pubmed-3617713 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Optical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-36177132013-04-10 Band selection in spectral imaging for non-invasive melanoma diagnosis Quinzán, Ianisse Sotoca, José M. Latorre-Carmona, Pedro Pla, Filiberto García-Sevilla, Pedro Boldó, Enrique Biomed Opt Express Spectroscopic Diagnostics A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The aim is to improve classification rate and help to identify those spectral bands that have a more important role in melanoma detection. All the processing steps were designed taking into account the low number of samples in the dataset, situation that is quite common in medical cases. The training/test sets are built using a Leave-One-Out strategy. SMOTE is applied in order to deal with the imbalance problem, together with the Qualified Majority Voting scheme (QMV). Support Vector Machines (SVM) is the classification method applied over each balanced set. Results indicate that all melanoma lesions are correctly classified, using a low number of bands, reaching 100% sensitivity and 72% specificity when considering nine (out of a total of 55) spectral bands. Optical Society of America 2013-03-04 /pmc/articles/PMC3617713/ /pubmed/23577286 http://dx.doi.org/10.1364/BOE.4.000514 Text en © 2013 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially. |
spellingShingle | Spectroscopic Diagnostics Quinzán, Ianisse Sotoca, José M. Latorre-Carmona, Pedro Pla, Filiberto García-Sevilla, Pedro Boldó, Enrique Band selection in spectral imaging for non-invasive melanoma diagnosis |
title | Band selection in spectral imaging for non-invasive melanoma diagnosis |
title_full | Band selection in spectral imaging for non-invasive melanoma diagnosis |
title_fullStr | Band selection in spectral imaging for non-invasive melanoma diagnosis |
title_full_unstemmed | Band selection in spectral imaging for non-invasive melanoma diagnosis |
title_short | Band selection in spectral imaging for non-invasive melanoma diagnosis |
title_sort | band selection in spectral imaging for non-invasive melanoma diagnosis |
topic | Spectroscopic Diagnostics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617713/ https://www.ncbi.nlm.nih.gov/pubmed/23577286 http://dx.doi.org/10.1364/BOE.4.000514 |
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