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Band selection in spectral imaging for non-invasive melanoma diagnosis

A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The a...

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Autores principales: Quinzán, Ianisse, Sotoca, José M., Latorre-Carmona, Pedro, Pla, Filiberto, García-Sevilla, Pedro, Boldó, Enrique
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Optical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617713/
https://www.ncbi.nlm.nih.gov/pubmed/23577286
http://dx.doi.org/10.1364/BOE.4.000514
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author Quinzán, Ianisse
Sotoca, José M.
Latorre-Carmona, Pedro
Pla, Filiberto
García-Sevilla, Pedro
Boldó, Enrique
author_facet Quinzán, Ianisse
Sotoca, José M.
Latorre-Carmona, Pedro
Pla, Filiberto
García-Sevilla, Pedro
Boldó, Enrique
author_sort Quinzán, Ianisse
collection PubMed
description A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The aim is to improve classification rate and help to identify those spectral bands that have a more important role in melanoma detection. All the processing steps were designed taking into account the low number of samples in the dataset, situation that is quite common in medical cases. The training/test sets are built using a Leave-One-Out strategy. SMOTE is applied in order to deal with the imbalance problem, together with the Qualified Majority Voting scheme (QMV). Support Vector Machines (SVM) is the classification method applied over each balanced set. Results indicate that all melanoma lesions are correctly classified, using a low number of bands, reaching 100% sensitivity and 72% specificity when considering nine (out of a total of 55) spectral bands.
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spelling pubmed-36177132013-04-10 Band selection in spectral imaging for non-invasive melanoma diagnosis Quinzán, Ianisse Sotoca, José M. Latorre-Carmona, Pedro Pla, Filiberto García-Sevilla, Pedro Boldó, Enrique Biomed Opt Express Spectroscopic Diagnostics A method consisting of the combination of the Synthetic Minority Over-Sampling TEchnique (SMOTE) and the Sequential Forward Floating Selection (SFFS) technique is used to do band selection in a highly imbalanced, small size, two-class multispectral dataset of melanoma and non-melanoma lesions. The aim is to improve classification rate and help to identify those spectral bands that have a more important role in melanoma detection. All the processing steps were designed taking into account the low number of samples in the dataset, situation that is quite common in medical cases. The training/test sets are built using a Leave-One-Out strategy. SMOTE is applied in order to deal with the imbalance problem, together with the Qualified Majority Voting scheme (QMV). Support Vector Machines (SVM) is the classification method applied over each balanced set. Results indicate that all melanoma lesions are correctly classified, using a low number of bands, reaching 100% sensitivity and 72% specificity when considering nine (out of a total of 55) spectral bands. Optical Society of America 2013-03-04 /pmc/articles/PMC3617713/ /pubmed/23577286 http://dx.doi.org/10.1364/BOE.4.000514 Text en © 2013 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially.
spellingShingle Spectroscopic Diagnostics
Quinzán, Ianisse
Sotoca, José M.
Latorre-Carmona, Pedro
Pla, Filiberto
García-Sevilla, Pedro
Boldó, Enrique
Band selection in spectral imaging for non-invasive melanoma diagnosis
title Band selection in spectral imaging for non-invasive melanoma diagnosis
title_full Band selection in spectral imaging for non-invasive melanoma diagnosis
title_fullStr Band selection in spectral imaging for non-invasive melanoma diagnosis
title_full_unstemmed Band selection in spectral imaging for non-invasive melanoma diagnosis
title_short Band selection in spectral imaging for non-invasive melanoma diagnosis
title_sort band selection in spectral imaging for non-invasive melanoma diagnosis
topic Spectroscopic Diagnostics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3617713/
https://www.ncbi.nlm.nih.gov/pubmed/23577286
http://dx.doi.org/10.1364/BOE.4.000514
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