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From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks
Growth and remodelling impact the network topology of complex systems, yet a general theory explaining how new links arise between existing nodes has been lacking, and little is known about the topological properties that facilitate link-prediction. Here we investigate the extent to which the connec...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3619147/ https://www.ncbi.nlm.nih.gov/pubmed/23563395 http://dx.doi.org/10.1038/srep01613 |
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author | Cannistraci, Carlo Vittorio Alanis-Lobato, Gregorio Ravasi, Timothy |
author_facet | Cannistraci, Carlo Vittorio Alanis-Lobato, Gregorio Ravasi, Timothy |
author_sort | Cannistraci, Carlo Vittorio |
collection | PubMed |
description | Growth and remodelling impact the network topology of complex systems, yet a general theory explaining how new links arise between existing nodes has been lacking, and little is known about the topological properties that facilitate link-prediction. Here we investigate the extent to which the connectivity evolution of a network might be predicted by mere topological features. We show how a link/community-based strategy triggers substantial prediction improvements because it accounts for the singular topology of several real networks organised in multiple local communities - a tendency here named local-community-paradigm (LCP). We observe that LCP networks are mainly formed by weak interactions and characterise heterogeneous and dynamic systems that use self-organisation as a major adaptation strategy. These systems seem designed for global delivery of information and processing via multiple local modules. Conversely, non-LCP networks have steady architectures formed by strong interactions, and seem designed for systems in which information/energy storage is crucial. |
format | Online Article Text |
id | pubmed-3619147 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-36191472013-04-09 From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks Cannistraci, Carlo Vittorio Alanis-Lobato, Gregorio Ravasi, Timothy Sci Rep Article Growth and remodelling impact the network topology of complex systems, yet a general theory explaining how new links arise between existing nodes has been lacking, and little is known about the topological properties that facilitate link-prediction. Here we investigate the extent to which the connectivity evolution of a network might be predicted by mere topological features. We show how a link/community-based strategy triggers substantial prediction improvements because it accounts for the singular topology of several real networks organised in multiple local communities - a tendency here named local-community-paradigm (LCP). We observe that LCP networks are mainly formed by weak interactions and characterise heterogeneous and dynamic systems that use self-organisation as a major adaptation strategy. These systems seem designed for global delivery of information and processing via multiple local modules. Conversely, non-LCP networks have steady architectures formed by strong interactions, and seem designed for systems in which information/energy storage is crucial. Nature Publishing Group 2013-04-08 /pmc/articles/PMC3619147/ /pubmed/23563395 http://dx.doi.org/10.1038/srep01613 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareALike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Cannistraci, Carlo Vittorio Alanis-Lobato, Gregorio Ravasi, Timothy From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title | From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title_full | From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title_fullStr | From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title_full_unstemmed | From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title_short | From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
title_sort | from link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3619147/ https://www.ncbi.nlm.nih.gov/pubmed/23563395 http://dx.doi.org/10.1038/srep01613 |
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