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Current challenges and future potential of tomato breeding using omics approaches
As tomatoes are one of the most important vegetables in the world, improvements in the quality and yield of tomato are strongly required. For this purpose, omics approaches such as metabolomics and transcriptomics are used not only for basic research to understand relationships between important tra...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3621443/ https://www.ncbi.nlm.nih.gov/pubmed/23641179 http://dx.doi.org/10.1270/jsbbs.63.31 |
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author | Kusano, Miyako Fukushima, Atsushi |
author_facet | Kusano, Miyako Fukushima, Atsushi |
author_sort | Kusano, Miyako |
collection | PubMed |
description | As tomatoes are one of the most important vegetables in the world, improvements in the quality and yield of tomato are strongly required. For this purpose, omics approaches such as metabolomics and transcriptomics are used not only for basic research to understand relationships between important traits and metabolism but also for the development of next generation breeding strategies of tomato plants, because an increase in the knowledge improves the taste and quality, stress resistance and/or potentially health-beneficial metabolites and is connected to improvements in the biochemical composition of tomatoes. Such omics data can be applied to network analyses to potentially reveal unknown cellular regulatory networks in tomato plants. The high-quality tomato genome that was sequenced in 2012 will likely accelerate the application of omics strategies, including next generation sequencing for tomato breeding. In this review, we highlight the current studies of omics network analyses of tomatoes and other plant species, in particular, a gene coexpression network. Key applications of omics approaches are also presented as case examples to improve economically important traits for tomato breeding. |
format | Online Article Text |
id | pubmed-3621443 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-36214432013-05-02 Current challenges and future potential of tomato breeding using omics approaches Kusano, Miyako Fukushima, Atsushi Breed Sci Review As tomatoes are one of the most important vegetables in the world, improvements in the quality and yield of tomato are strongly required. For this purpose, omics approaches such as metabolomics and transcriptomics are used not only for basic research to understand relationships between important traits and metabolism but also for the development of next generation breeding strategies of tomato plants, because an increase in the knowledge improves the taste and quality, stress resistance and/or potentially health-beneficial metabolites and is connected to improvements in the biochemical composition of tomatoes. Such omics data can be applied to network analyses to potentially reveal unknown cellular regulatory networks in tomato plants. The high-quality tomato genome that was sequenced in 2012 will likely accelerate the application of omics strategies, including next generation sequencing for tomato breeding. In this review, we highlight the current studies of omics network analyses of tomatoes and other plant species, in particular, a gene coexpression network. Key applications of omics approaches are also presented as case examples to improve economically important traits for tomato breeding. Japanese Society of Breeding 2013-03-01 2013-03 /pmc/articles/PMC3621443/ /pubmed/23641179 http://dx.doi.org/10.1270/jsbbs.63.31 Text en Copyright © 2013 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Kusano, Miyako Fukushima, Atsushi Current challenges and future potential of tomato breeding using omics approaches |
title | Current challenges and future potential of tomato breeding using omics approaches |
title_full | Current challenges and future potential of tomato breeding using omics approaches |
title_fullStr | Current challenges and future potential of tomato breeding using omics approaches |
title_full_unstemmed | Current challenges and future potential of tomato breeding using omics approaches |
title_short | Current challenges and future potential of tomato breeding using omics approaches |
title_sort | current challenges and future potential of tomato breeding using omics approaches |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3621443/ https://www.ncbi.nlm.nih.gov/pubmed/23641179 http://dx.doi.org/10.1270/jsbbs.63.31 |
work_keys_str_mv | AT kusanomiyako currentchallengesandfuturepotentialoftomatobreedingusingomicsapproaches AT fukushimaatsushi currentchallengesandfuturepotentialoftomatobreedingusingomicsapproaches |