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Nocardia aciditolerans sp. nov., isolated from a spruce forest soil
Actinomycetes growing on acidified starch-casein agar seeded with suspensions of litter and mineral soil from a spruce forest were provisionally assigned to the genus Nocardia based upon colonial properties. Representative isolates were found to grow optimally at pH 5.5, have chemotaxonomic and morp...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3621993/ https://www.ncbi.nlm.nih.gov/pubmed/23371034 http://dx.doi.org/10.1007/s10482-013-9887-3 |
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author | Golinska, Patrycja Wang, Dylan Goodfellow, Michael |
author_facet | Golinska, Patrycja Wang, Dylan Goodfellow, Michael |
author_sort | Golinska, Patrycja |
collection | PubMed |
description | Actinomycetes growing on acidified starch-casein agar seeded with suspensions of litter and mineral soil from a spruce forest were provisionally assigned to the genus Nocardia based upon colonial properties. Representative isolates were found to grow optimally at pH 5.5, have chemotaxonomic and morphological features consistent with their assignment to the genus Nocardia and formed two closely related subclades in the Nocardia 16S rRNA gene tree. DNA:DNA relatedness assays showed that representatives of the subclades belong to a single genomic species. The isolates were distantly associated with their nearest phylogenetic neighbour, the type strain of Nocardia kruczakiae, and were distinguished readily from the latter based on phenotypic properties. On the basis of these data it is proposed that the isolates merit recognition as a new species, Nocardia aciditolerans sp. nov. The type strain is isolate CSCA68(T) (=KACC 17155(T) = NCIMB 14829(T) = DSM 45801(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-9887-3) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-3621993 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-36219932013-04-10 Nocardia aciditolerans sp. nov., isolated from a spruce forest soil Golinska, Patrycja Wang, Dylan Goodfellow, Michael Antonie Van Leeuwenhoek Original Paper Actinomycetes growing on acidified starch-casein agar seeded with suspensions of litter and mineral soil from a spruce forest were provisionally assigned to the genus Nocardia based upon colonial properties. Representative isolates were found to grow optimally at pH 5.5, have chemotaxonomic and morphological features consistent with their assignment to the genus Nocardia and formed two closely related subclades in the Nocardia 16S rRNA gene tree. DNA:DNA relatedness assays showed that representatives of the subclades belong to a single genomic species. The isolates were distantly associated with their nearest phylogenetic neighbour, the type strain of Nocardia kruczakiae, and were distinguished readily from the latter based on phenotypic properties. On the basis of these data it is proposed that the isolates merit recognition as a new species, Nocardia aciditolerans sp. nov. The type strain is isolate CSCA68(T) (=KACC 17155(T) = NCIMB 14829(T) = DSM 45801(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-9887-3) contains supplementary material, which is available to authorized users. Springer Netherlands 2013-02-01 2013 /pmc/articles/PMC3621993/ /pubmed/23371034 http://dx.doi.org/10.1007/s10482-013-9887-3 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by/2.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Paper Golinska, Patrycja Wang, Dylan Goodfellow, Michael Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title | Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title_full | Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title_fullStr | Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title_full_unstemmed | Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title_short | Nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
title_sort | nocardia aciditolerans sp. nov., isolated from a spruce forest soil |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3621993/ https://www.ncbi.nlm.nih.gov/pubmed/23371034 http://dx.doi.org/10.1007/s10482-013-9887-3 |
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