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A random-permutations-based approach to fast read alignment
BACKGROUND: Read alignment is a computational bottleneck in some sequencing projects. Most of the existing software packages for read alignment are based on two algorithmic approaches: prefix-trees and hash-tables. We propose a new approach to read alignment using random permutations of strings. RES...
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2013
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3622637/ https://www.ncbi.nlm.nih.gov/pubmed/23734846 http://dx.doi.org/10.1186/1471-2105-14-S5-S8 |