Cargando…
CLASS: constrained transcript assembly of RNA-seq reads
BACKGROUND: RNA-seq has revolutionized our ability to survey the cellular transcriptome in great detail. However, while several approaches have been developed, the problem of assembling the short reads into full-length transcripts remains challenging. RESULTS: We developed a novel algorithm and soft...
Autores principales: | Song, Li, Florea, Liliana |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3622639/ https://www.ncbi.nlm.nih.gov/pubmed/23734605 http://dx.doi.org/10.1186/1471-2105-14-S5-S14 |
Ejemplares similares
-
CLASS2: accurate and efficient splice variant annotation from RNA-seq reads
por: Song, Li, et al.
Publicado: (2016) -
Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study
por: Zhao, Qiong-Yi, et al.
Publicado: (2011) -
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
por: Song, Li, et al.
Publicado: (2015) -
Detrimental effects of duplicate reads and low complexity regions on RNA- and ChIP-seq data
por: Dozmorov, Mikhail G, et al.
Publicado: (2015) -
Evaluation of short read metagenomic assembly
por: Charuvaka, Anveshi, et al.
Publicado: (2011)