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PASTA: splice junction identification from RNA-Sequencing data
BACKGROUND: Next generation transcriptome sequencing (RNA-Seq) is emerging as a powerful experimental tool for the study of alternative splicing and its regulation, but requires ad-hoc analysis methods and tools. PASTA (Patterned Alignments for Splicing and Transcriptome Analysis) is a splice juncti...
Autores principales: | Tang, Shaojun, Riva, Alberto |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3623791/ https://www.ncbi.nlm.nih.gov/pubmed/23557086 http://dx.doi.org/10.1186/1471-2105-14-116 |
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