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A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation
Registration of diffusion-weighted magnetic resonance images (DW-MRIs) is a key step for population studies, or construction of brain atlases, among other important tasks. Given the high dimensionality of the data, registration is usually performed by relying on scalar representative images, such as...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625902/ https://www.ncbi.nlm.nih.gov/pubmed/23596381 http://dx.doi.org/10.3389/fnins.2013.00041 |
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author | Duarte-Carvajalino, Julio M. Sapiro, Guillermo Harel, Noam Lenglet, Christophe |
author_facet | Duarte-Carvajalino, Julio M. Sapiro, Guillermo Harel, Noam Lenglet, Christophe |
author_sort | Duarte-Carvajalino, Julio M. |
collection | PubMed |
description | Registration of diffusion-weighted magnetic resonance images (DW-MRIs) is a key step for population studies, or construction of brain atlases, among other important tasks. Given the high dimensionality of the data, registration is usually performed by relying on scalar representative images, such as the fractional anisotropy (FA) and non-diffusion-weighted (b0) images, thereby ignoring much of the directional information conveyed by DW-MR datasets itself. Alternatively, model-based registration algorithms have been proposed to exploit information on the preferred fiber orientation(s) at each voxel. Models such as the diffusion tensor or orientation distribution function (ODF) have been used for this purpose. Tensor-based registration methods rely on a model that does not completely capture the information contained in DW-MRIs, and largely depends on the accurate estimation of tensors. ODF-based approaches are more recent and computationally challenging, but also better describe complex fiber configurations thereby potentially improving the accuracy of DW-MRI registration. A new algorithm based on angular interpolation of the diffusion-weighted volumes was proposed for affine registration, and does not rely on any specific local diffusion model. In this work, we first extensively compare the performance of registration algorithms based on (i) angular interpolation, (ii) non-diffusion-weighted scalar volume (b0), and (iii) diffusion tensor image (DTI). Moreover, we generalize the concept of angular interpolation (AI) to non-linear image registration, and implement it in the FMRIB Software Library (FSL). We demonstrate that AI registration of DW-MRIs is a powerful alternative to volume and tensor-based approaches. In particular, we show that AI improves the registration accuracy in many cases over existing state-of-the-art algorithms, while providing registered raw DW-MRI data, which can be used for any subsequent analysis. |
format | Online Article Text |
id | pubmed-3625902 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36259022013-04-17 A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation Duarte-Carvajalino, Julio M. Sapiro, Guillermo Harel, Noam Lenglet, Christophe Front Neurosci Neuroscience Registration of diffusion-weighted magnetic resonance images (DW-MRIs) is a key step for population studies, or construction of brain atlases, among other important tasks. Given the high dimensionality of the data, registration is usually performed by relying on scalar representative images, such as the fractional anisotropy (FA) and non-diffusion-weighted (b0) images, thereby ignoring much of the directional information conveyed by DW-MR datasets itself. Alternatively, model-based registration algorithms have been proposed to exploit information on the preferred fiber orientation(s) at each voxel. Models such as the diffusion tensor or orientation distribution function (ODF) have been used for this purpose. Tensor-based registration methods rely on a model that does not completely capture the information contained in DW-MRIs, and largely depends on the accurate estimation of tensors. ODF-based approaches are more recent and computationally challenging, but also better describe complex fiber configurations thereby potentially improving the accuracy of DW-MRI registration. A new algorithm based on angular interpolation of the diffusion-weighted volumes was proposed for affine registration, and does not rely on any specific local diffusion model. In this work, we first extensively compare the performance of registration algorithms based on (i) angular interpolation, (ii) non-diffusion-weighted scalar volume (b0), and (iii) diffusion tensor image (DTI). Moreover, we generalize the concept of angular interpolation (AI) to non-linear image registration, and implement it in the FMRIB Software Library (FSL). We demonstrate that AI registration of DW-MRIs is a powerful alternative to volume and tensor-based approaches. In particular, we show that AI improves the registration accuracy in many cases over existing state-of-the-art algorithms, while providing registered raw DW-MRI data, which can be used for any subsequent analysis. Frontiers Media S.A. 2013-04-04 /pmc/articles/PMC3625902/ /pubmed/23596381 http://dx.doi.org/10.3389/fnins.2013.00041 Text en Copyright © 2013 Duarte-Carvajalino, Sapiro, Harel and Lenglet. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Neuroscience Duarte-Carvajalino, Julio M. Sapiro, Guillermo Harel, Noam Lenglet, Christophe A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title | A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title_full | A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title_fullStr | A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title_full_unstemmed | A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title_short | A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation |
title_sort | framework for linear and non-linear registration of diffusion-weighted mris using angular interpolation |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625902/ https://www.ncbi.nlm.nih.gov/pubmed/23596381 http://dx.doi.org/10.3389/fnins.2013.00041 |
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