SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

BACKGROUND: There is a rapidly increasing amount of de novo genome assembly using next-generation sequencing (NGS) short reads; however, several big challenges remain to be overcome in order for this to be efficient and accurate. SOAPdenovo has been successfully applied to assemble many published ge...

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Detalles Bibliográficos
Autores principales: Luo, Ruibang, Liu, Binghang, Xie, Yinlong, Li, Zhenyu, Huang, Weihua, Yuan, Jianying, He, Guangzhu, Chen, Yanxiang, Pan, Qi, Liu, Yunjie, Tang, Jingbo, Wu, Gengxiong, Zhang, Hao, Shi, Yujian, Liu, Yong, Yu, Chang, Wang, Bo, Lu, Yao, Han, Changlei, Cheung, David W, Yiu, Siu-Ming, Peng, Shaoliang, Xiaoqian, Zhu, Liu, Guangming, Liao, Xiangke, Li, Yingrui, Yang, Huanming, Wang, Jian, Lam, Tak-Wah, Wang, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3626529/
https://www.ncbi.nlm.nih.gov/pubmed/23587118
http://dx.doi.org/10.1186/2047-217X-1-18

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