Cargando…

The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions

BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of in...

Descripción completa

Detalles Bibliográficos
Autores principales: Vandervalk, Ben, McCarthy, E Luke, Cruz-Toledo, José, Klein, Artjom, Baker, Christopher J O, Dumontier, Michel, Wilkinson, Mark D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications Inc. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3628156/
https://www.ncbi.nlm.nih.gov/pubmed/23612187
http://dx.doi.org/10.2196/resprot.2315
_version_ 1782266387801047040
author Vandervalk, Ben
McCarthy, E Luke
Cruz-Toledo, José
Klein, Artjom
Baker, Christopher J O
Dumontier, Michel
Wilkinson, Mark D
author_facet Vandervalk, Ben
McCarthy, E Luke
Cruz-Toledo, José
Klein, Artjom
Baker, Christopher J O
Dumontier, Michel
Wilkinson, Mark D
author_sort Vandervalk, Ben
collection PubMed
description BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. OBJECTIVE: The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. METHODS: We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. RESULTS: A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. CONCLUSIONS: The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this prototype was limited to a single knowledge domain (drug/drug interactions), the proposed architecture is generalizable, and could act as the foundation for much richer personalized-health-Web clients, while importantly providing a novel and personalizable mechanism for clinical experts to inject their expertise into the browsing experience of their patients in the form of customized semantic queries and ontologies.
format Online
Article
Text
id pubmed-3628156
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher JMIR Publications Inc.
record_format MEDLINE/PubMed
spelling pubmed-36281562013-04-22 The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions Vandervalk, Ben McCarthy, E Luke Cruz-Toledo, José Klein, Artjom Baker, Christopher J O Dumontier, Michel Wilkinson, Mark D JMIR Res Protoc Original Paper BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. OBJECTIVE: The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. METHODS: We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. RESULTS: A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. CONCLUSIONS: The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this prototype was limited to a single knowledge domain (drug/drug interactions), the proposed architecture is generalizable, and could act as the foundation for much richer personalized-health-Web clients, while importantly providing a novel and personalizable mechanism for clinical experts to inject their expertise into the browsing experience of their patients in the form of customized semantic queries and ontologies. JMIR Publications Inc. 2013-04-05 /pmc/articles/PMC3628156/ /pubmed/23612187 http://dx.doi.org/10.2196/resprot.2315 Text en ©Ben Vandervalk, E Luke McCarthy, José Cruz-Toledo, Artjom Klein, Christopher J O Baker, Michel Dumontier, Mark D Wilkinson. Originally published in JMIR Research Protocols (http://www.researchprotocols.org), 05.04.2013. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Research Protocols, is properly cited. The complete bibliographic information, a link to the original publication on http://www.researchprotocols.org, as well as this copyright and license information must be included.
spellingShingle Original Paper
Vandervalk, Ben
McCarthy, E Luke
Cruz-Toledo, José
Klein, Artjom
Baker, Christopher J O
Dumontier, Michel
Wilkinson, Mark D
The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title_full The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title_fullStr The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title_full_unstemmed The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title_short The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
title_sort sadi personal health lens: a web browser-based system for identifying personally relevant drug interactions
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3628156/
https://www.ncbi.nlm.nih.gov/pubmed/23612187
http://dx.doi.org/10.2196/resprot.2315
work_keys_str_mv AT vandervalkben thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT mccarthyeluke thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT cruztoledojose thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT kleinartjom thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT bakerchristopherjo thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT dumontiermichel thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT wilkinsonmarkd thesadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT vandervalkben sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT mccarthyeluke sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT cruztoledojose sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT kleinartjom sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT bakerchristopherjo sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT dumontiermichel sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions
AT wilkinsonmarkd sadipersonalhealthlensawebbrowserbasedsystemforidentifyingpersonallyrelevantdruginteractions