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The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions
BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of in...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications Inc.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3628156/ https://www.ncbi.nlm.nih.gov/pubmed/23612187 http://dx.doi.org/10.2196/resprot.2315 |
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author | Vandervalk, Ben McCarthy, E Luke Cruz-Toledo, José Klein, Artjom Baker, Christopher J O Dumontier, Michel Wilkinson, Mark D |
author_facet | Vandervalk, Ben McCarthy, E Luke Cruz-Toledo, José Klein, Artjom Baker, Christopher J O Dumontier, Michel Wilkinson, Mark D |
author_sort | Vandervalk, Ben |
collection | PubMed |
description | BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. OBJECTIVE: The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. METHODS: We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. RESULTS: A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. CONCLUSIONS: The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this prototype was limited to a single knowledge domain (drug/drug interactions), the proposed architecture is generalizable, and could act as the foundation for much richer personalized-health-Web clients, while importantly providing a novel and personalizable mechanism for clinical experts to inject their expertise into the browsing experience of their patients in the form of customized semantic queries and ontologies. |
format | Online Article Text |
id | pubmed-3628156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | JMIR Publications Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36281562013-04-22 The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions Vandervalk, Ben McCarthy, E Luke Cruz-Toledo, José Klein, Artjom Baker, Christopher J O Dumontier, Michel Wilkinson, Mark D JMIR Res Protoc Original Paper BACKGROUND: The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. OBJECTIVE: The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. METHODS: We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. RESULTS: A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. CONCLUSIONS: The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this prototype was limited to a single knowledge domain (drug/drug interactions), the proposed architecture is generalizable, and could act as the foundation for much richer personalized-health-Web clients, while importantly providing a novel and personalizable mechanism for clinical experts to inject their expertise into the browsing experience of their patients in the form of customized semantic queries and ontologies. JMIR Publications Inc. 2013-04-05 /pmc/articles/PMC3628156/ /pubmed/23612187 http://dx.doi.org/10.2196/resprot.2315 Text en ©Ben Vandervalk, E Luke McCarthy, José Cruz-Toledo, Artjom Klein, Christopher J O Baker, Michel Dumontier, Mark D Wilkinson. Originally published in JMIR Research Protocols (http://www.researchprotocols.org), 05.04.2013. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Research Protocols, is properly cited. The complete bibliographic information, a link to the original publication on http://www.researchprotocols.org, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Vandervalk, Ben McCarthy, E Luke Cruz-Toledo, José Klein, Artjom Baker, Christopher J O Dumontier, Michel Wilkinson, Mark D The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title | The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title_full | The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title_fullStr | The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title_full_unstemmed | The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title_short | The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions |
title_sort | sadi personal health lens: a web browser-based system for identifying personally relevant drug interactions |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3628156/ https://www.ncbi.nlm.nih.gov/pubmed/23612187 http://dx.doi.org/10.2196/resprot.2315 |
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