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A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells

The non-receptor tyrosine kinase Src and receptor tyrosine kinase epidermal growth factor receptor (EGFR/ErbB1) have been established as collaborators in cellular signaling and their combined dysregulation plays key roles in human cancers, including breast cancer. In part due to the complexity of th...

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Autores principales: Helikar, Tomáš, Kochi, Naomi, Kowal, Bryan, Dimri, Manjari, Naramura, Mayumi, Raja, Srikumar M., Band, Vimla, Band, Hamid, Rogers, Jim A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3630219/
https://www.ncbi.nlm.nih.gov/pubmed/23637902
http://dx.doi.org/10.1371/journal.pone.0061757
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author Helikar, Tomáš
Kochi, Naomi
Kowal, Bryan
Dimri, Manjari
Naramura, Mayumi
Raja, Srikumar M.
Band, Vimla
Band, Hamid
Rogers, Jim A.
author_facet Helikar, Tomáš
Kochi, Naomi
Kowal, Bryan
Dimri, Manjari
Naramura, Mayumi
Raja, Srikumar M.
Band, Vimla
Band, Hamid
Rogers, Jim A.
author_sort Helikar, Tomáš
collection PubMed
description The non-receptor tyrosine kinase Src and receptor tyrosine kinase epidermal growth factor receptor (EGFR/ErbB1) have been established as collaborators in cellular signaling and their combined dysregulation plays key roles in human cancers, including breast cancer. In part due to the complexity of the biochemical network associated with the regulation of these proteins as well as their cellular functions, the role of Src in EGFR regulation remains unclear. Herein we present a new comprehensive, multi-scale dynamical model of ErbB receptor signal transduction in human mammary epithelial cells. This model, constructed manually from published biochemical literature, consists of 245 nodes representing proteins and their post-translational modifications sites, and over 1,000 biochemical interactions. Using computer simulations of the model, we find it is able to reproduce a number of cellular phenomena. Furthermore, the model predicts that overexpression of Src results in increased endocytosis of EGFR in the absence/low amount of the epidermal growth factor (EGF). Our subsequent laboratory experiments also suggest increased internalization of EGFR upon Src overexpression under EGF-deprived conditions, further supporting this model-generated hypothesis.
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spelling pubmed-36302192013-05-01 A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells Helikar, Tomáš Kochi, Naomi Kowal, Bryan Dimri, Manjari Naramura, Mayumi Raja, Srikumar M. Band, Vimla Band, Hamid Rogers, Jim A. PLoS One Research Article The non-receptor tyrosine kinase Src and receptor tyrosine kinase epidermal growth factor receptor (EGFR/ErbB1) have been established as collaborators in cellular signaling and their combined dysregulation plays key roles in human cancers, including breast cancer. In part due to the complexity of the biochemical network associated with the regulation of these proteins as well as their cellular functions, the role of Src in EGFR regulation remains unclear. Herein we present a new comprehensive, multi-scale dynamical model of ErbB receptor signal transduction in human mammary epithelial cells. This model, constructed manually from published biochemical literature, consists of 245 nodes representing proteins and their post-translational modifications sites, and over 1,000 biochemical interactions. Using computer simulations of the model, we find it is able to reproduce a number of cellular phenomena. Furthermore, the model predicts that overexpression of Src results in increased endocytosis of EGFR in the absence/low amount of the epidermal growth factor (EGF). Our subsequent laboratory experiments also suggest increased internalization of EGFR upon Src overexpression under EGF-deprived conditions, further supporting this model-generated hypothesis. Public Library of Science 2013-04-18 /pmc/articles/PMC3630219/ /pubmed/23637902 http://dx.doi.org/10.1371/journal.pone.0061757 Text en © 2013 Helikar et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Helikar, Tomáš
Kochi, Naomi
Kowal, Bryan
Dimri, Manjari
Naramura, Mayumi
Raja, Srikumar M.
Band, Vimla
Band, Hamid
Rogers, Jim A.
A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title_full A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title_fullStr A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title_full_unstemmed A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title_short A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells
title_sort comprehensive, multi-scale dynamical model of erbb receptor signal transduction in human mammary epithelial cells
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3630219/
https://www.ncbi.nlm.nih.gov/pubmed/23637902
http://dx.doi.org/10.1371/journal.pone.0061757
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