Cargando…

PhenoMiner: quantitative phenotype curation at the rat genome database

The Rat Genome Database (RGD) is the premier repository of rat genomic and genetic data and currently houses >40 000 rat gene records as well as human and mouse orthologs, >2000 rat and 1900 human quantitative trait loci (QTLs) records and >2900 rat strain records. Biological information cu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Laulederkind, Stanley J. F., Liu, Weisong, Smith, Jennifer R., Hayman, G. Thomas, Wang, Shur-Jen, Nigam, Rajni, Petri, Victoria, Lowry, Timothy F., de Pons, Jeff, Dwinell, Melinda R., Shimoyama, Mary
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2013
Materias:	Original Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3630803/ https://www.ncbi.nlm.nih.gov/pubmed/23603846 http://dx.doi.org/10.1093/database/bat015

Ejemplares similares

PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus. Application in hypertension and renal disease
por: Wang, Shur-Jen, et al.
Publicado: (2015)

OntoMate: a text-mining tool aiding curation at the Rat Genome Database
por: Liu, Weisong, et al.
Publicado: (2015)

The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data
por: Laulederkind, Stanley J. F., et al.
Publicado: (2011)

The Rat Genome Database Curators: Who, What, Where, Why
por: Shimoyama, Mary, et al.
Publicado: (2009)

The Disease Portals, disease–gene annotation and the RGD disease ontology at the Rat Genome Database
por: Hayman, G. Thomas, et al.
Publicado: (2016)

RGD: A comparative genomics platform
por: Shimoyama, Mary, et al.
Publicado: (2011)

The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
por: Shimoyama, Mary, et al.
Publicado: (2014)

The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications
por: Smith, Jennifer R, et al.
Publicado: (2013)

Ontology searching and browsing at the Rat Genome Database
por: Laulederkind, Stanley J. F., et al.
Publicado: (2012)

Disease, Models, Variants and Altered Pathways—Journeying RGD Through the Magnifying Glass
por: Petri, Victoria, et al.
Publicado: (2015)

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases
por: Collier, Nigel, et al.
Publicado: (2015)

Exploring human disease using the Rat Genome Database
por: Shimoyama, Mary, et al.
Publicado: (2016)

The Rat Genome Database 2013—data, tools and users
por: Laulederkind, Stanley J. F., et al.
Publicado: (2013)

Disease pathways at the Rat Genome Database Pathway Portal: genes in context—a network approach to understanding the molecular mechanisms of disease
por: Petri, Victoria, et al.
Publicado: (2014)

Analysis of disease-associated objects at the Rat Genome Database
por: Wang, Shur-Jen, et al.
Publicado: (2013)

The updated RGD Pathway Portal utilizes increased curation efficiency and provides expanded pathway information
por: Hayman, G Thomas, et al.
Publicado: (2013)

The pathway ontology – updates and applications
por: Petri, Victoria, et al.
Publicado: (2014)

Integrated curation and data mining for disease and phenotype models at the Rat Genome Database
por: Wang, Shur-Jen, et al.
Publicado: (2019)

The Rat Genome Database 2009: variation, ontologies and pathways
por: Dwinell, Melinda R., et al.
Publicado: (2009)

The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform
por: Smith, Jennifer R, et al.
Publicado: (2020)

Quantitative phenotype analysis to identify, validate and compare rat disease models
por: Zhao, Yiqing, et al.
Publicado: (2019)

Rat Strain Ontology: structured controlled vocabulary designed to facilitate access to strain data at RGD
por: Nigam, Rajni, et al.
Publicado: (2013)

PheNominal: an EHR-integrated web application for structured deep phenotyping at the point of care
por: Havrilla, James M., et al.
Publicado: (2022)

The Rat Genome Database Pathway Portal
por: Petri, Victoria, et al.
Publicado: (2011)

Three Ontologies to Define Phenotype Measurement Data
por: Shimoyama, Mary, et al.
Publicado: (2012)

PhenoDigm: analyzing curated annotations to associate animal models with human diseases
por: Smedley, Damian, et al.
Publicado: (2013)

Ontological Analysis of Coronavirus Associated Human Genes at the COVID-19 Disease Portal
por: Wang, Shur-Jen, et al.
Publicado: (2022)

Pheno 2019
Publicado: (2019)

Pheno 2005 Symposium
Publicado: (2005)

PHENO 2001 Symposium
Publicado: (2001)

Future Perspectives at HL-LHC Prospects for Pheno26, Pheno31, and beyond
por: Jeanty, Laura
Publicado: (2021)

MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses
por: Vedi, Mahima, et al.
Publicado: (2022)

PhenoMapping: a protocol to map cellular phenotypes to metabolic bottlenecks, identify conditional essentiality, and curate metabolic models
por: Chiappino-Pepe, Anush, et al.
Publicado: (2021)

Enhancing Phenotype Recognition in Clinical Notes Using Large Language Models: PhenoBCBERT and PhenoGPT
por: Yang, Jingye, et al.
Publicado: (2023)

Phenomenology 2017 Symposium (PHENO 2017)
Publicado: (2017)

Phenomenology 2022 Symposium (PHENO 2022)
Publicado: (2022)

Pheno- and Genotyping of Hopanoid Production in Acidobacteria
por: Damsté, Jaap S. Sinninghe, et al.
Publicado: (2017)

Testing Hopkins’ Bioclimatic Law with PhenoCam data
por: Richardson, Andrew D., et al.
Publicado: (2019)

Rat Genome and Model Resources
por: Shimoyama, Mary, et al.
Publicado: (2017)

Chromosome substitution modulates resistance to ischemia reperfusion injury in Brown Norway rats
por: Basile, David P., et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_vc261f2ngueupjou4mc3ok4cuq