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p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization

Various missense mutations in the VHL gene have been reported among patients with familial bilateral pheochromocytoma. However, the p.Arg82Leu mutation in the VHL gene described here among patients with familial bilateral pheochromocytoma, has never been reported previously in a germline configurati...

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Autores principales: John, Anulekha Mary, C, George Priya Doss, Ebenazer, Andrew, Seshadri, Mandalam Subramaniam, Nair, Aravindan, Rajaratnam, Simon, Pai, Rekha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633967/
https://www.ncbi.nlm.nih.gov/pubmed/23626751
http://dx.doi.org/10.1371/journal.pone.0061908
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author John, Anulekha Mary
C, George Priya Doss
Ebenazer, Andrew
Seshadri, Mandalam Subramaniam
Nair, Aravindan
Rajaratnam, Simon
Pai, Rekha
author_facet John, Anulekha Mary
C, George Priya Doss
Ebenazer, Andrew
Seshadri, Mandalam Subramaniam
Nair, Aravindan
Rajaratnam, Simon
Pai, Rekha
author_sort John, Anulekha Mary
collection PubMed
description Various missense mutations in the VHL gene have been reported among patients with familial bilateral pheochromocytoma. However, the p.Arg82Leu mutation in the VHL gene described here among patients with familial bilateral pheochromocytoma, has never been reported previously in a germline configuration. Interestingly, long-term follow-up of these patients indicated that the mutation might have had little impact on the normal function of the VHL gene, since all of them have remained asymptomatic. We further attempted to correlate this information with the results obtained by in silico analysis of this mutation using SIFT, PhD-SNP SVM profile, MutPred, PolyPhen2, and SNPs&GO prediction tools. To gain, new mechanistic insight into the structural effect, we mapped the mutation on to 3D structure (PDB ID 1LM8). Further, we analyzed the structural level changes in time scale level with respect to native and mutant protein complexes by using 12 ns molecular dynamics simulation method. Though these methods predict the mutation to have a pathogenic potential, it remains to be seen if these patients will eventually develop symptomatic disease.
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spelling pubmed-36339672013-04-26 p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization John, Anulekha Mary C, George Priya Doss Ebenazer, Andrew Seshadri, Mandalam Subramaniam Nair, Aravindan Rajaratnam, Simon Pai, Rekha PLoS One Research Article Various missense mutations in the VHL gene have been reported among patients with familial bilateral pheochromocytoma. However, the p.Arg82Leu mutation in the VHL gene described here among patients with familial bilateral pheochromocytoma, has never been reported previously in a germline configuration. Interestingly, long-term follow-up of these patients indicated that the mutation might have had little impact on the normal function of the VHL gene, since all of them have remained asymptomatic. We further attempted to correlate this information with the results obtained by in silico analysis of this mutation using SIFT, PhD-SNP SVM profile, MutPred, PolyPhen2, and SNPs&GO prediction tools. To gain, new mechanistic insight into the structural effect, we mapped the mutation on to 3D structure (PDB ID 1LM8). Further, we analyzed the structural level changes in time scale level with respect to native and mutant protein complexes by using 12 ns molecular dynamics simulation method. Though these methods predict the mutation to have a pathogenic potential, it remains to be seen if these patients will eventually develop symptomatic disease. Public Library of Science 2013-04-23 /pmc/articles/PMC3633967/ /pubmed/23626751 http://dx.doi.org/10.1371/journal.pone.0061908 Text en © 2013 John et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
John, Anulekha Mary
C, George Priya Doss
Ebenazer, Andrew
Seshadri, Mandalam Subramaniam
Nair, Aravindan
Rajaratnam, Simon
Pai, Rekha
p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title_full p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title_fullStr p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title_full_unstemmed p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title_short p.Arg82Leu von Hippel-Lindau (VHL) Gene Mutation among Three Members of a Family with Familial Bilateral Pheochromocytoma in India: Molecular Analysis and In Silico Characterization
title_sort p.arg82leu von hippel-lindau (vhl) gene mutation among three members of a family with familial bilateral pheochromocytoma in india: molecular analysis and in silico characterization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633967/
https://www.ncbi.nlm.nih.gov/pubmed/23626751
http://dx.doi.org/10.1371/journal.pone.0061908
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