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Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3635030/ https://www.ncbi.nlm.nih.gov/pubmed/23630491 http://dx.doi.org/10.3389/fncom.2013.00038 |
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author | Vergun, Svyatoslav Deshpande, Alok S. Meier, Timothy B. Song, Jie Tudorascu, Dana L. Nair, Veena A. Singh, Vikas Biswal, Bharat B. Meyerand, M. Elizabeth Birn, Rasmus M. Prabhakaran, Vivek |
author_facet | Vergun, Svyatoslav Deshpande, Alok S. Meier, Timothy B. Song, Jie Tudorascu, Dana L. Nair, Veena A. Singh, Vikas Biswal, Bharat B. Meyerand, M. Elizabeth Birn, Rasmus M. Prabhakaran, Vivek |
author_sort | Vergun, Svyatoslav |
collection | PubMed |
description | The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as task difficulty and performance. Here we applied a Support Vector Machine (SVM) linear classifier as well as a support vector machine regressor to rs-fMRI data in order to compare age-related differences in four of the major functional brain networks: the default, cingulo-opercular, fronto-parietal, and sensorimotor. A linear SVM classifier discriminated between young and old subjects with 84% accuracy (p-value < 1 × 10(−7)). A linear SVR age predictor performed reasonably well in continuous age prediction (R(2) = 0.419, p-value < 1 × 10(−8)). These findings reveal that differences in intrinsic connectivity as measured with rs-fMRI exist between subjects, and that SVM methods are capable of detecting and utilizing these differences for classification and prediction. |
format | Online Article Text |
id | pubmed-3635030 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36350302013-04-29 Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data Vergun, Svyatoslav Deshpande, Alok S. Meier, Timothy B. Song, Jie Tudorascu, Dana L. Nair, Veena A. Singh, Vikas Biswal, Bharat B. Meyerand, M. Elizabeth Birn, Rasmus M. Prabhakaran, Vivek Front Comput Neurosci Neuroscience The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as task difficulty and performance. Here we applied a Support Vector Machine (SVM) linear classifier as well as a support vector machine regressor to rs-fMRI data in order to compare age-related differences in four of the major functional brain networks: the default, cingulo-opercular, fronto-parietal, and sensorimotor. A linear SVM classifier discriminated between young and old subjects with 84% accuracy (p-value < 1 × 10(−7)). A linear SVR age predictor performed reasonably well in continuous age prediction (R(2) = 0.419, p-value < 1 × 10(−8)). These findings reveal that differences in intrinsic connectivity as measured with rs-fMRI exist between subjects, and that SVM methods are capable of detecting and utilizing these differences for classification and prediction. Frontiers Media S.A. 2013-04-25 /pmc/articles/PMC3635030/ /pubmed/23630491 http://dx.doi.org/10.3389/fncom.2013.00038 Text en Copyright © 2013 Vergun, Deshpande, Meier, Song, Tudorascu, Nair, Singh, Biswal, Meyerand, Birn and Prabhakaran. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Neuroscience Vergun, Svyatoslav Deshpande, Alok S. Meier, Timothy B. Song, Jie Tudorascu, Dana L. Nair, Veena A. Singh, Vikas Biswal, Bharat B. Meyerand, M. Elizabeth Birn, Rasmus M. Prabhakaran, Vivek Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title | Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title_full | Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title_fullStr | Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title_full_unstemmed | Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title_short | Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data |
title_sort | characterizing functional connectivity differences in aging adults using machine learning on resting state fmri data |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3635030/ https://www.ncbi.nlm.nih.gov/pubmed/23630491 http://dx.doi.org/10.3389/fncom.2013.00038 |
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