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Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data

The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as...

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Autores principales: Vergun, Svyatoslav, Deshpande, Alok S., Meier, Timothy B., Song, Jie, Tudorascu, Dana L., Nair, Veena A., Singh, Vikas, Biswal, Bharat B., Meyerand, M. Elizabeth, Birn, Rasmus M., Prabhakaran, Vivek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3635030/
https://www.ncbi.nlm.nih.gov/pubmed/23630491
http://dx.doi.org/10.3389/fncom.2013.00038
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author Vergun, Svyatoslav
Deshpande, Alok S.
Meier, Timothy B.
Song, Jie
Tudorascu, Dana L.
Nair, Veena A.
Singh, Vikas
Biswal, Bharat B.
Meyerand, M. Elizabeth
Birn, Rasmus M.
Prabhakaran, Vivek
author_facet Vergun, Svyatoslav
Deshpande, Alok S.
Meier, Timothy B.
Song, Jie
Tudorascu, Dana L.
Nair, Veena A.
Singh, Vikas
Biswal, Bharat B.
Meyerand, M. Elizabeth
Birn, Rasmus M.
Prabhakaran, Vivek
author_sort Vergun, Svyatoslav
collection PubMed
description The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as task difficulty and performance. Here we applied a Support Vector Machine (SVM) linear classifier as well as a support vector machine regressor to rs-fMRI data in order to compare age-related differences in four of the major functional brain networks: the default, cingulo-opercular, fronto-parietal, and sensorimotor. A linear SVM classifier discriminated between young and old subjects with 84% accuracy (p-value < 1 × 10(−7)). A linear SVR age predictor performed reasonably well in continuous age prediction (R(2) = 0.419, p-value < 1 × 10(−8)). These findings reveal that differences in intrinsic connectivity as measured with rs-fMRI exist between subjects, and that SVM methods are capable of detecting and utilizing these differences for classification and prediction.
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spelling pubmed-36350302013-04-29 Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data Vergun, Svyatoslav Deshpande, Alok S. Meier, Timothy B. Song, Jie Tudorascu, Dana L. Nair, Veena A. Singh, Vikas Biswal, Bharat B. Meyerand, M. Elizabeth Birn, Rasmus M. Prabhakaran, Vivek Front Comput Neurosci Neuroscience The brain at rest consists of spatially distributed but functionally connected regions, called intrinsic connectivity networks (ICNs). Resting state functional magnetic resonance imaging (rs-fMRI) has emerged as a way to characterize brain networks without confounds associated with task fMRI such as task difficulty and performance. Here we applied a Support Vector Machine (SVM) linear classifier as well as a support vector machine regressor to rs-fMRI data in order to compare age-related differences in four of the major functional brain networks: the default, cingulo-opercular, fronto-parietal, and sensorimotor. A linear SVM classifier discriminated between young and old subjects with 84% accuracy (p-value < 1 × 10(−7)). A linear SVR age predictor performed reasonably well in continuous age prediction (R(2) = 0.419, p-value < 1 × 10(−8)). These findings reveal that differences in intrinsic connectivity as measured with rs-fMRI exist between subjects, and that SVM methods are capable of detecting and utilizing these differences for classification and prediction. Frontiers Media S.A. 2013-04-25 /pmc/articles/PMC3635030/ /pubmed/23630491 http://dx.doi.org/10.3389/fncom.2013.00038 Text en Copyright © 2013 Vergun, Deshpande, Meier, Song, Tudorascu, Nair, Singh, Biswal, Meyerand, Birn and Prabhakaran. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.
spellingShingle Neuroscience
Vergun, Svyatoslav
Deshpande, Alok S.
Meier, Timothy B.
Song, Jie
Tudorascu, Dana L.
Nair, Veena A.
Singh, Vikas
Biswal, Bharat B.
Meyerand, M. Elizabeth
Birn, Rasmus M.
Prabhakaran, Vivek
Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title_full Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title_fullStr Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title_full_unstemmed Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title_short Characterizing Functional Connectivity Differences in Aging Adults using Machine Learning on Resting State fMRI Data
title_sort characterizing functional connectivity differences in aging adults using machine learning on resting state fmri data
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3635030/
https://www.ncbi.nlm.nih.gov/pubmed/23630491
http://dx.doi.org/10.3389/fncom.2013.00038
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