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Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma

BACKGROUND: Frequent deletions of the kinesin-like protein gene 1B (KIF1B) have been reported in neural tumors. Recently, a genome-wide association study revealed an association between polymorphisms in the KIF1B gene and the risk of hepatocellular carcinoma (HCC), and several case-control studies h...

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Autores principales: Wang, Zhi-Chao, Gao, Qiang, Shi, Jie-Yi, Yang, Liu-Xiao, Zhou, Jian, Wang, Xiao-Ying, Shi, Ying-Hong, Ke, Ai-Wu, Shi, Guo-Ming, Ding, Zhen-Bin, Dai, Zhi, Qiu, Shuang-Jian, Fan, Jia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3636275/
https://www.ncbi.nlm.nih.gov/pubmed/23634229
http://dx.doi.org/10.1371/journal.pone.0062571
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author Wang, Zhi-Chao
Gao, Qiang
Shi, Jie-Yi
Yang, Liu-Xiao
Zhou, Jian
Wang, Xiao-Ying
Shi, Ying-Hong
Ke, Ai-Wu
Shi, Guo-Ming
Ding, Zhen-Bin
Dai, Zhi
Qiu, Shuang-Jian
Fan, Jia
author_facet Wang, Zhi-Chao
Gao, Qiang
Shi, Jie-Yi
Yang, Liu-Xiao
Zhou, Jian
Wang, Xiao-Ying
Shi, Ying-Hong
Ke, Ai-Wu
Shi, Guo-Ming
Ding, Zhen-Bin
Dai, Zhi
Qiu, Shuang-Jian
Fan, Jia
author_sort Wang, Zhi-Chao
collection PubMed
description BACKGROUND: Frequent deletions of the kinesin-like protein gene 1B (KIF1B) have been reported in neural tumors. Recently, a genome-wide association study revealed an association between polymorphisms in the KIF1B gene and the risk of hepatocellular carcinoma (HCC), and several case-control studies have further investigated this relationship. However, these studies have yielded controversial results. We therefore performed a meta-analysis to derive a more precise estimation of the association between the KIF1B gene polymorphisms and HCC risk. METHODOLOGY/PRINCIPAL FINDING: PubMed, EMBASE, the ISI Web of Science and the CNKI databases were systematically searched to identify relevant studies. A total of 5 studies containing 13 cohorts with 5,773 cases and 6,404 controls were included. Odds ratios (ORs) with corresponding 95% confidence intervals (CIs) were used to assess the strength of the associations. Subgroup analyses were conducted based on ethnicities, sample sizes and quality scores. Overall, the G allele at rs17401966 of the KIF1B gene was associated with a significantly decreased risk for HCC (OR  = 0.81, 95%CI: 0.70–0.93; P = 0.003). Furthermore, subgroup analyses showed that the G allele at rs17401966 of the KIF1B gene significantly reduced the risk for HCC in Chinese cohorts (OR  = 0.76, 95%CI: 0.64–0.90; P = 0.002), large-sample-size cohorts (OR  = 0.80, 95%CI: 0.73–0.88, P<0.01) and high-quality cohorts (OR  = 0.78, 95%CI: 0.71–0.87, P<0.01). However, no significant associations were found in small-sample-size cohorts, studies with low-quality scores and when excluding the cohorts from the study reporting the original discovery. CONCLUSION/SIGNIFICANCE: These findings demonstrate that the presence of the G allele at rs17401966 of the KIF1B gene may decrease the risk for HCC and suggest that KIF1B may play a critical role in the development of HCC. High-quality studies with larger sample sizes and different ethnic populations will be of great value to further confirm these findings.
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spelling pubmed-36362752013-04-30 Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma Wang, Zhi-Chao Gao, Qiang Shi, Jie-Yi Yang, Liu-Xiao Zhou, Jian Wang, Xiao-Ying Shi, Ying-Hong Ke, Ai-Wu Shi, Guo-Ming Ding, Zhen-Bin Dai, Zhi Qiu, Shuang-Jian Fan, Jia PLoS One Research Article BACKGROUND: Frequent deletions of the kinesin-like protein gene 1B (KIF1B) have been reported in neural tumors. Recently, a genome-wide association study revealed an association between polymorphisms in the KIF1B gene and the risk of hepatocellular carcinoma (HCC), and several case-control studies have further investigated this relationship. However, these studies have yielded controversial results. We therefore performed a meta-analysis to derive a more precise estimation of the association between the KIF1B gene polymorphisms and HCC risk. METHODOLOGY/PRINCIPAL FINDING: PubMed, EMBASE, the ISI Web of Science and the CNKI databases were systematically searched to identify relevant studies. A total of 5 studies containing 13 cohorts with 5,773 cases and 6,404 controls were included. Odds ratios (ORs) with corresponding 95% confidence intervals (CIs) were used to assess the strength of the associations. Subgroup analyses were conducted based on ethnicities, sample sizes and quality scores. Overall, the G allele at rs17401966 of the KIF1B gene was associated with a significantly decreased risk for HCC (OR  = 0.81, 95%CI: 0.70–0.93; P = 0.003). Furthermore, subgroup analyses showed that the G allele at rs17401966 of the KIF1B gene significantly reduced the risk for HCC in Chinese cohorts (OR  = 0.76, 95%CI: 0.64–0.90; P = 0.002), large-sample-size cohorts (OR  = 0.80, 95%CI: 0.73–0.88, P<0.01) and high-quality cohorts (OR  = 0.78, 95%CI: 0.71–0.87, P<0.01). However, no significant associations were found in small-sample-size cohorts, studies with low-quality scores and when excluding the cohorts from the study reporting the original discovery. CONCLUSION/SIGNIFICANCE: These findings demonstrate that the presence of the G allele at rs17401966 of the KIF1B gene may decrease the risk for HCC and suggest that KIF1B may play a critical role in the development of HCC. High-quality studies with larger sample sizes and different ethnic populations will be of great value to further confirm these findings. Public Library of Science 2013-04-25 /pmc/articles/PMC3636275/ /pubmed/23634229 http://dx.doi.org/10.1371/journal.pone.0062571 Text en © 2013 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Wang, Zhi-Chao
Gao, Qiang
Shi, Jie-Yi
Yang, Liu-Xiao
Zhou, Jian
Wang, Xiao-Ying
Shi, Ying-Hong
Ke, Ai-Wu
Shi, Guo-Ming
Ding, Zhen-Bin
Dai, Zhi
Qiu, Shuang-Jian
Fan, Jia
Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title_full Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title_fullStr Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title_full_unstemmed Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title_short Genetic Polymorphism of the Kinesin-Like Protein KIF1B Gene and the Risk of Hepatocellular Carcinoma
title_sort genetic polymorphism of the kinesin-like protein kif1b gene and the risk of hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3636275/
https://www.ncbi.nlm.nih.gov/pubmed/23634229
http://dx.doi.org/10.1371/journal.pone.0062571
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