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Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analys...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638162/ https://www.ncbi.nlm.nih.gov/pubmed/23625301 http://dx.doi.org/10.1038/srep01744 |
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author | Chen, Xiujie Liu, Xiangqiong Jia, Xiaodong Tan, Fujian Yang, Ruizhi Chen, Sheng Liu, Lei Wang, Yunfeng Chen, Yuelong |
author_facet | Chen, Xiujie Liu, Xiangqiong Jia, Xiaodong Tan, Fujian Yang, Ruizhi Chen, Sheng Liu, Lei Wang, Yunfeng Chen, Yuelong |
author_sort | Chen, Xiujie |
collection | PubMed |
description | Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analysed the function of each module; revealed the potential accompanying actions of the ADRs and the new ADR-related proteins (ADRPs) to a unique ADR and studied the characteristics of composition, subcellular location and tissue distribution of these ADRPs by comparing them with drug-related proteins (DRPs). The results indicated that ADRs are mainly caused by risk drug-related proteins (RDRPs) and that drug off-target effects are a secondary cause. Biological processes that enzymes involve are the main reason for the occurrence of ADRs. However, drug-related transporters have a higher risk of inducing ADRs than drug-related enzymes do, and ADRPs locating in the cell membrane tend to induce multiple ADRs. |
format | Online Article Text |
id | pubmed-3638162 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-36381622013-04-29 Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations Chen, Xiujie Liu, Xiangqiong Jia, Xiaodong Tan, Fujian Yang, Ruizhi Chen, Sheng Liu, Lei Wang, Yunfeng Chen, Yuelong Sci Rep Article Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analysed the function of each module; revealed the potential accompanying actions of the ADRs and the new ADR-related proteins (ADRPs) to a unique ADR and studied the characteristics of composition, subcellular location and tissue distribution of these ADRPs by comparing them with drug-related proteins (DRPs). The results indicated that ADRs are mainly caused by risk drug-related proteins (RDRPs) and that drug off-target effects are a secondary cause. Biological processes that enzymes involve are the main reason for the occurrence of ADRs. However, drug-related transporters have a higher risk of inducing ADRs than drug-related enzymes do, and ADRPs locating in the cell membrane tend to induce multiple ADRs. Nature Publishing Group 2013-04-29 /pmc/articles/PMC3638162/ /pubmed/23625301 http://dx.doi.org/10.1038/srep01744 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Chen, Xiujie Liu, Xiangqiong Jia, Xiaodong Tan, Fujian Yang, Ruizhi Chen, Sheng Liu, Lei Wang, Yunfeng Chen, Yuelong Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title | Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title_full | Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title_fullStr | Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title_full_unstemmed | Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title_short | Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations |
title_sort | network characteristic analysis of adr-related proteins and identification of adr-adr associations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638162/ https://www.ncbi.nlm.nih.gov/pubmed/23625301 http://dx.doi.org/10.1038/srep01744 |
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