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Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations

Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analys...

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Autores principales: Chen, Xiujie, Liu, Xiangqiong, Jia, Xiaodong, Tan, Fujian, Yang, Ruizhi, Chen, Sheng, Liu, Lei, Wang, Yunfeng, Chen, Yuelong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638162/
https://www.ncbi.nlm.nih.gov/pubmed/23625301
http://dx.doi.org/10.1038/srep01744
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author Chen, Xiujie
Liu, Xiangqiong
Jia, Xiaodong
Tan, Fujian
Yang, Ruizhi
Chen, Sheng
Liu, Lei
Wang, Yunfeng
Chen, Yuelong
author_facet Chen, Xiujie
Liu, Xiangqiong
Jia, Xiaodong
Tan, Fujian
Yang, Ruizhi
Chen, Sheng
Liu, Lei
Wang, Yunfeng
Chen, Yuelong
author_sort Chen, Xiujie
collection PubMed
description Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analysed the function of each module; revealed the potential accompanying actions of the ADRs and the new ADR-related proteins (ADRPs) to a unique ADR and studied the characteristics of composition, subcellular location and tissue distribution of these ADRPs by comparing them with drug-related proteins (DRPs). The results indicated that ADRs are mainly caused by risk drug-related proteins (RDRPs) and that drug off-target effects are a secondary cause. Biological processes that enzymes involve are the main reason for the occurrence of ADRs. However, drug-related transporters have a higher risk of inducing ADRs than drug-related enzymes do, and ADRPs locating in the cell membrane tend to induce multiple ADRs.
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spelling pubmed-36381622013-04-29 Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations Chen, Xiujie Liu, Xiangqiong Jia, Xiaodong Tan, Fujian Yang, Ruizhi Chen, Sheng Liu, Lei Wang, Yunfeng Chen, Yuelong Sci Rep Article Adverse drug reactions (ADRs) are caused by interactions between drugs or their metabolites and specific proteins. Knowledge of these proteins is important for facilitating mechanistic research of ADRs and new drug discovery. Here, we identified 41 network modules from an ADR-protein network; analysed the function of each module; revealed the potential accompanying actions of the ADRs and the new ADR-related proteins (ADRPs) to a unique ADR and studied the characteristics of composition, subcellular location and tissue distribution of these ADRPs by comparing them with drug-related proteins (DRPs). The results indicated that ADRs are mainly caused by risk drug-related proteins (RDRPs) and that drug off-target effects are a secondary cause. Biological processes that enzymes involve are the main reason for the occurrence of ADRs. However, drug-related transporters have a higher risk of inducing ADRs than drug-related enzymes do, and ADRPs locating in the cell membrane tend to induce multiple ADRs. Nature Publishing Group 2013-04-29 /pmc/articles/PMC3638162/ /pubmed/23625301 http://dx.doi.org/10.1038/srep01744 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Chen, Xiujie
Liu, Xiangqiong
Jia, Xiaodong
Tan, Fujian
Yang, Ruizhi
Chen, Sheng
Liu, Lei
Wang, Yunfeng
Chen, Yuelong
Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title_full Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title_fullStr Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title_full_unstemmed Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title_short Network Characteristic Analysis of ADR-related Proteins and Identification of ADR-ADR Associations
title_sort network characteristic analysis of adr-related proteins and identification of adr-adr associations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638162/
https://www.ncbi.nlm.nih.gov/pubmed/23625301
http://dx.doi.org/10.1038/srep01744
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