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Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307)
The Porcupine Seabight Challenger Mound is the first carbonate mound to be drilled (∼270 m) and analyzed in detail microbiologically and biogeochemically. Two mound sites and a non-mound Reference site were analyzed with a range of molecular techniques [catalyzed reporter deposition-fluorescence in...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638347/ https://www.ncbi.nlm.nih.gov/pubmed/18826439 http://dx.doi.org/10.1111/j.1462-2920.2008.01759.x |
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author | Webster, Gordon Blazejak, Anna Cragg, Barry A Schippers, Axel Sass, Henrik Rinna, Joachim Tang, Xiaohong Mathes, Falko Ferdelman, Timothy G Fry, John C Weightman, Andrew J Parkes, R John |
author_facet | Webster, Gordon Blazejak, Anna Cragg, Barry A Schippers, Axel Sass, Henrik Rinna, Joachim Tang, Xiaohong Mathes, Falko Ferdelman, Timothy G Fry, John C Weightman, Andrew J Parkes, R John |
author_sort | Webster, Gordon |
collection | PubMed |
description | The Porcupine Seabight Challenger Mound is the first carbonate mound to be drilled (∼270 m) and analyzed in detail microbiologically and biogeochemically. Two mound sites and a non-mound Reference site were analyzed with a range of molecular techniques [catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH), quantitative PCR (16S rRNA and functional genes, dsrA and mcrA), and 16S rRNA gene PCR-DGGE] to assess prokaryotic diversity, and this was compared with the distribution of total and culturable cell counts, radiotracer activity measurements and geochemistry. There was a significant and active prokaryotic community both within and beneath the carbonate mound. Although total cell numbers at certain depths were lower than the global average for other subseafloor sediments and prokaryotic activities were relatively low (iron and sulfate reduction, acetate oxidation, methanogenesis) they were significantly enhanced compared with the Reference site. In addition, there was some stimulation of prokaryotic activity in the deepest sediments (Miocene, > 10 Ma) including potential for anaerobic oxidation of methane activity below the mound base. Both Bacteria and Archaea were present, with neither dominant, and these were related to sequences commonly found in other subseafloor sediments. With an estimate of some 1600 mounds in the Porcupine Basin alone, carbonate mounds may represent a significant prokaryotic subseafloor habitat. |
format | Online Article Text |
id | pubmed-3638347 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-36383472013-04-29 Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) Webster, Gordon Blazejak, Anna Cragg, Barry A Schippers, Axel Sass, Henrik Rinna, Joachim Tang, Xiaohong Mathes, Falko Ferdelman, Timothy G Fry, John C Weightman, Andrew J Parkes, R John Environ Microbiol Research Articles The Porcupine Seabight Challenger Mound is the first carbonate mound to be drilled (∼270 m) and analyzed in detail microbiologically and biogeochemically. Two mound sites and a non-mound Reference site were analyzed with a range of molecular techniques [catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH), quantitative PCR (16S rRNA and functional genes, dsrA and mcrA), and 16S rRNA gene PCR-DGGE] to assess prokaryotic diversity, and this was compared with the distribution of total and culturable cell counts, radiotracer activity measurements and geochemistry. There was a significant and active prokaryotic community both within and beneath the carbonate mound. Although total cell numbers at certain depths were lower than the global average for other subseafloor sediments and prokaryotic activities were relatively low (iron and sulfate reduction, acetate oxidation, methanogenesis) they were significantly enhanced compared with the Reference site. In addition, there was some stimulation of prokaryotic activity in the deepest sediments (Miocene, > 10 Ma) including potential for anaerobic oxidation of methane activity below the mound base. Both Bacteria and Archaea were present, with neither dominant, and these were related to sequences commonly found in other subseafloor sediments. With an estimate of some 1600 mounds in the Porcupine Basin alone, carbonate mounds may represent a significant prokaryotic subseafloor habitat. Blackwell Publishing Ltd 2009-01 /pmc/articles/PMC3638347/ /pubmed/18826439 http://dx.doi.org/10.1111/j.1462-2920.2008.01759.x Text en © 2008 The Authors. Journal compilation © 2008 Society for Applied Microbiology and Blackwell Publishing Ltd http://creativecommons.org/licenses/by/2.5/ Re-use of this article is permitted in accordance with the Creative Commons Deed, Attribution 2.5, which does not permit commercial exploitation. |
spellingShingle | Research Articles Webster, Gordon Blazejak, Anna Cragg, Barry A Schippers, Axel Sass, Henrik Rinna, Joachim Tang, Xiaohong Mathes, Falko Ferdelman, Timothy G Fry, John C Weightman, Andrew J Parkes, R John Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title | Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title_full | Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title_fullStr | Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title_full_unstemmed | Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title_short | Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307) |
title_sort | subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the porcupine seabight (iodp expedition 307) |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638347/ https://www.ncbi.nlm.nih.gov/pubmed/18826439 http://dx.doi.org/10.1111/j.1462-2920.2008.01759.x |
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