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A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism
Prompt and accurate diagnosis of acute ischemic stroke is critical to seek acute therapy. In traditional Chinese medicine (TCM) science, there is a comprehensive system of diagnosis and medical care of acute ischemic stroke. Here we introduce a two-level model for the analysis of TCM syndrome of acu...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638621/ https://www.ncbi.nlm.nih.gov/pubmed/23662126 http://dx.doi.org/10.1155/2013/293010 |
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author | Dai, Wen Liu, Xi Zhang, Zhichen Chen, Jianxin Guo, Rongjuan Zheng, Hong Jin, Xianglan Wen, Shaoxin Gao, Yibo Li, Tiangang Lu, Peng Zhang, Yunling |
author_facet | Dai, Wen Liu, Xi Zhang, Zhichen Chen, Jianxin Guo, Rongjuan Zheng, Hong Jin, Xianglan Wen, Shaoxin Gao, Yibo Li, Tiangang Lu, Peng Zhang, Yunling |
author_sort | Dai, Wen |
collection | PubMed |
description | Prompt and accurate diagnosis of acute ischemic stroke is critical to seek acute therapy. In traditional Chinese medicine (TCM) science, there is a comprehensive system of diagnosis and medical care of acute ischemic stroke. Here we introduce a two-level model for the analysis of TCM syndrome of acute ischemic stroke. Owing to the limitation of sample size and imbalance, we focused on the analysis of wind-phlegm collateral obstruction syndrome (Feng Tan Yu Zu Zheng). Firstly, a Support-Vector-Machine- (SVM-) based diagnostic model was set up through selection of core symptoms. After pairwise undersampling, we improved the performance of prediction and generated the core symptoms-based diagnostic model of wind-phlegm collateral obstruction syndrome. Next, Pathway Pattern-based method and MetaDrug platform were used to shed light on the molecular basis of the significance of core symptoms in three complementary aspects: symptom-gene-pathway multilayer correlation network, enriched pathways, and most relevant interaction network. The integration of diagnostic model and molecular mechanism analysis creates an interesting perspective for better understanding the syndrome. The two-level model would provide a new opportunity for the study of TCM syndromes. |
format | Online Article Text |
id | pubmed-3638621 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-36386212013-05-09 A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism Dai, Wen Liu, Xi Zhang, Zhichen Chen, Jianxin Guo, Rongjuan Zheng, Hong Jin, Xianglan Wen, Shaoxin Gao, Yibo Li, Tiangang Lu, Peng Zhang, Yunling Evid Based Complement Alternat Med Research Article Prompt and accurate diagnosis of acute ischemic stroke is critical to seek acute therapy. In traditional Chinese medicine (TCM) science, there is a comprehensive system of diagnosis and medical care of acute ischemic stroke. Here we introduce a two-level model for the analysis of TCM syndrome of acute ischemic stroke. Owing to the limitation of sample size and imbalance, we focused on the analysis of wind-phlegm collateral obstruction syndrome (Feng Tan Yu Zu Zheng). Firstly, a Support-Vector-Machine- (SVM-) based diagnostic model was set up through selection of core symptoms. After pairwise undersampling, we improved the performance of prediction and generated the core symptoms-based diagnostic model of wind-phlegm collateral obstruction syndrome. Next, Pathway Pattern-based method and MetaDrug platform were used to shed light on the molecular basis of the significance of core symptoms in three complementary aspects: symptom-gene-pathway multilayer correlation network, enriched pathways, and most relevant interaction network. The integration of diagnostic model and molecular mechanism analysis creates an interesting perspective for better understanding the syndrome. The two-level model would provide a new opportunity for the study of TCM syndromes. Hindawi Publishing Corporation 2013 2013-04-04 /pmc/articles/PMC3638621/ /pubmed/23662126 http://dx.doi.org/10.1155/2013/293010 Text en Copyright © 2013 Wen Dai et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Dai, Wen Liu, Xi Zhang, Zhichen Chen, Jianxin Guo, Rongjuan Zheng, Hong Jin, Xianglan Wen, Shaoxin Gao, Yibo Li, Tiangang Lu, Peng Zhang, Yunling A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title | A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title_full | A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title_fullStr | A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title_full_unstemmed | A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title_short | A Two-Level Model for the Analysis of Syndrome of Acute Ischemic Stroke: From Diagnostic Model to Molecular Mechanism |
title_sort | two-level model for the analysis of syndrome of acute ischemic stroke: from diagnostic model to molecular mechanism |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638621/ https://www.ncbi.nlm.nih.gov/pubmed/23662126 http://dx.doi.org/10.1155/2013/293010 |
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