GPU-Based Cloud Service for Smith-Waterman Algorithm Using Frequency Distance Filtration Scheme

As the conventional means of analyzing the similarity between a query sequence and database sequences, the Smith-Waterman algorithm is feasible for a database search owing to its high sensitivity. However, this algorithm is still quite time consuming. CUDA programming can improve computations effici...

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Detalles Bibliográficos
Autores principales: Lee, Sheng-Ta, Lin, Chun-Yuan, Hung, Che Lun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638642/
https://www.ncbi.nlm.nih.gov/pubmed/23653898
http://dx.doi.org/10.1155/2013/721738

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3638642/
https://www.ncbi.nlm.nih.gov/pubmed/23653898
http://dx.doi.org/10.1155/2013/721738

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