Cargando…

MabsBase: A Mycobacterium abscessus Genome and Annotation Database

Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide f...

Descripción completa

Detalles Bibliográficos
Autores principales: Heydari, Hamed, Wee, Wei Yee, Lokanathan, Naline, Hari, Ranjeev, Mohamed Yusoff, Aini, Beh, Ching Yew, Yazdi, Amir Hessam, Wong, Guat Jah, Ngeow, Yun Fong, Choo, Siew Woh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3639173/
https://www.ncbi.nlm.nih.gov/pubmed/23658631
http://dx.doi.org/10.1371/journal.pone.0062443
_version_ 1782475910813843456
author Heydari, Hamed
Wee, Wei Yee
Lokanathan, Naline
Hari, Ranjeev
Mohamed Yusoff, Aini
Beh, Ching Yew
Yazdi, Amir Hessam
Wong, Guat Jah
Ngeow, Yun Fong
Choo, Siew Woh
author_facet Heydari, Hamed
Wee, Wei Yee
Lokanathan, Naline
Hari, Ranjeev
Mohamed Yusoff, Aini
Beh, Ching Yew
Yazdi, Amir Hessam
Wong, Guat Jah
Ngeow, Yun Fong
Choo, Siew Woh
author_sort Heydari, Hamed
collection PubMed
description Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my.
format Online
Article
Text
id pubmed-3639173
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-36391732013-05-08 MabsBase: A Mycobacterium abscessus Genome and Annotation Database Heydari, Hamed Wee, Wei Yee Lokanathan, Naline Hari, Ranjeev Mohamed Yusoff, Aini Beh, Ching Yew Yazdi, Amir Hessam Wong, Guat Jah Ngeow, Yun Fong Choo, Siew Woh PLoS One Research Article Mycobacterium abscessus is a rapidly growing non-tuberculous mycobacterial species that has been associated with a wide spectrum of human infections. As the classification and biology of this organism is still not well understood, comparative genomic analysis on members of this species may provide further insights on their taxonomy, phylogeny, pathogenicity and other information that may contribute to better management of infections. The MabsBase described in this paper is a user-friendly database providing access to whole-genome sequences of newly discovered M. abscessus strains as well as resources for whole-genome annotations and computational predictions, to support the expanding scientific community interested in M. abscessus research. The MabsBase is freely available at http://mabscessus.um.edu.my. Public Library of Science 2013-04-29 /pmc/articles/PMC3639173/ /pubmed/23658631 http://dx.doi.org/10.1371/journal.pone.0062443 Text en © 2013 Heydari et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Heydari, Hamed
Wee, Wei Yee
Lokanathan, Naline
Hari, Ranjeev
Mohamed Yusoff, Aini
Beh, Ching Yew
Yazdi, Amir Hessam
Wong, Guat Jah
Ngeow, Yun Fong
Choo, Siew Woh
MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title_full MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title_fullStr MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title_full_unstemmed MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title_short MabsBase: A Mycobacterium abscessus Genome and Annotation Database
title_sort mabsbase: a mycobacterium abscessus genome and annotation database
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3639173/
https://www.ncbi.nlm.nih.gov/pubmed/23658631
http://dx.doi.org/10.1371/journal.pone.0062443
work_keys_str_mv AT heydarihamed mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT weeweiyee mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT lokanathannaline mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT hariranjeev mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT mohamedyusoffaini mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT behchingyew mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT yazdiamirhessam mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT wongguatjah mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT ngeowyunfong mabsbaseamycobacteriumabscessusgenomeandannotationdatabase
AT choosiewwoh mabsbaseamycobacteriumabscessusgenomeandannotationdatabase