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The role of structural bioinformatics resources in the era of integrative structural biology
The history and the current state of the PDB and EMDB archives is briefly described, as well as some of the challenges that they face. It seems natural that the role of structural biology archives will change from being a pure repository of historic data into becoming an indispensable resource for t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3640467/ https://www.ncbi.nlm.nih.gov/pubmed/23633580 http://dx.doi.org/10.1107/S0907444913001157 |
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author | Gutmanas, Aleksandras Oldfield, Thomas J. Patwardhan, Ardan Sen, Sanchayita Velankar, Sameer Kleywegt, Gerard J. |
author_facet | Gutmanas, Aleksandras Oldfield, Thomas J. Patwardhan, Ardan Sen, Sanchayita Velankar, Sameer Kleywegt, Gerard J. |
author_sort | Gutmanas, Aleksandras |
collection | PubMed |
description | The history and the current state of the PDB and EMDB archives is briefly described, as well as some of the challenges that they face. It seems natural that the role of structural biology archives will change from being a pure repository of historic data into becoming an indispensable resource for the wider biomedical community. As part of this transformation, it will be necessary to validate the biomacromolecular structure data and ensure the highest possible quality for the archive holdings, to combine structural data from different spatial scales into a unified resource and to integrate structural data with functional, genetic and taxonomic data as well as other information available in bioinformatics resources. Some recent developments and plans to address these challenges at PDBe are presented. |
format | Online Article Text |
id | pubmed-3640467 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-36404672013-05-01 The role of structural bioinformatics resources in the era of integrative structural biology Gutmanas, Aleksandras Oldfield, Thomas J. Patwardhan, Ardan Sen, Sanchayita Velankar, Sameer Kleywegt, Gerard J. Acta Crystallogr D Biol Crystallogr Integrative Structural Biology The history and the current state of the PDB and EMDB archives is briefly described, as well as some of the challenges that they face. It seems natural that the role of structural biology archives will change from being a pure repository of historic data into becoming an indispensable resource for the wider biomedical community. As part of this transformation, it will be necessary to validate the biomacromolecular structure data and ensure the highest possible quality for the archive holdings, to combine structural data from different spatial scales into a unified resource and to integrate structural data with functional, genetic and taxonomic data as well as other information available in bioinformatics resources. Some recent developments and plans to address these challenges at PDBe are presented. International Union of Crystallography 2013-04-19 /pmc/articles/PMC3640467/ /pubmed/23633580 http://dx.doi.org/10.1107/S0907444913001157 Text en © Gutmanas et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Integrative Structural Biology Gutmanas, Aleksandras Oldfield, Thomas J. Patwardhan, Ardan Sen, Sanchayita Velankar, Sameer Kleywegt, Gerard J. The role of structural bioinformatics resources in the era of integrative structural biology |
title | The role of structural bioinformatics resources in the era of integrative structural biology |
title_full | The role of structural bioinformatics resources in the era of integrative structural biology |
title_fullStr | The role of structural bioinformatics resources in the era of integrative structural biology |
title_full_unstemmed | The role of structural bioinformatics resources in the era of integrative structural biology |
title_short | The role of structural bioinformatics resources in the era of integrative structural biology |
title_sort | role of structural bioinformatics resources in the era of integrative structural biology |
topic | Integrative Structural Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3640467/ https://www.ncbi.nlm.nih.gov/pubmed/23633580 http://dx.doi.org/10.1107/S0907444913001157 |
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