Cargando…

Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours

BACKGROUND: The RNase III enzyme DICER1 plays a central role in maturation of microRNAs. Identification of neoplasia-associated germ-line and somatic mutations in DICER1 indicates that mis-expression of miRNAs in cancer may result from defects in their processing. As part of a recent study of DICER1...

Descripción completa

Detalles Bibliográficos
Autores principales: Sabbaghian, Nelly, Bahubeshi, Amin, Shuen, Andrew Y, Kanetsky, Peter A, Tischkowitz, Marc D, Nathanson, Katherine L, Foulkes, William D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3642033/
https://www.ncbi.nlm.nih.gov/pubmed/23547758
http://dx.doi.org/10.1186/1756-0500-6-127
_version_ 1782268086742679552
author Sabbaghian, Nelly
Bahubeshi, Amin
Shuen, Andrew Y
Kanetsky, Peter A
Tischkowitz, Marc D
Nathanson, Katherine L
Foulkes, William D
author_facet Sabbaghian, Nelly
Bahubeshi, Amin
Shuen, Andrew Y
Kanetsky, Peter A
Tischkowitz, Marc D
Nathanson, Katherine L
Foulkes, William D
author_sort Sabbaghian, Nelly
collection PubMed
description BACKGROUND: The RNase III enzyme DICER1 plays a central role in maturation of microRNAs. Identification of neoplasia-associated germ-line and somatic mutations in DICER1 indicates that mis-expression of miRNAs in cancer may result from defects in their processing. As part of a recent study of DICER1 RNase III domains in 96 testicular germ cell tumors, a single RNase IIIb domain mutation was identified in a seminoma. To further explore the importance of DICER1 mutations in the etiology of testicular germ cell tumors (TGCT), we studied germ-line DNA samples from 43 probands diagnosed with familial TGCT. FINDINGS: We carried out High Resolution Melting Curve Analysis of DICER1 exons 2–12, 14–19, 21 and 24–27. All questionable melt curves were subjected to confirmatory Sanger sequencing. Sanger sequencing was used for exons 13, 20, 22 and 23. Intron-exon boundaries were included in all analyses. We identified 12 previously reported single nucleotide polymorphisms and two novel single nucleotide variants. No likely deleterious variants were identified; notably no mutations that were predicted to truncate the protein were identified. CONCLUSIONS: Taken together with previous studies, the findings reported here suggest a very limited role for either germ-line or somatic DICER1 mutations in the etiology of TGCT.
format Online
Article
Text
id pubmed-3642033
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-36420332013-05-03 Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours Sabbaghian, Nelly Bahubeshi, Amin Shuen, Andrew Y Kanetsky, Peter A Tischkowitz, Marc D Nathanson, Katherine L Foulkes, William D BMC Res Notes Short Report BACKGROUND: The RNase III enzyme DICER1 plays a central role in maturation of microRNAs. Identification of neoplasia-associated germ-line and somatic mutations in DICER1 indicates that mis-expression of miRNAs in cancer may result from defects in their processing. As part of a recent study of DICER1 RNase III domains in 96 testicular germ cell tumors, a single RNase IIIb domain mutation was identified in a seminoma. To further explore the importance of DICER1 mutations in the etiology of testicular germ cell tumors (TGCT), we studied germ-line DNA samples from 43 probands diagnosed with familial TGCT. FINDINGS: We carried out High Resolution Melting Curve Analysis of DICER1 exons 2–12, 14–19, 21 and 24–27. All questionable melt curves were subjected to confirmatory Sanger sequencing. Sanger sequencing was used for exons 13, 20, 22 and 23. Intron-exon boundaries were included in all analyses. We identified 12 previously reported single nucleotide polymorphisms and two novel single nucleotide variants. No likely deleterious variants were identified; notably no mutations that were predicted to truncate the protein were identified. CONCLUSIONS: Taken together with previous studies, the findings reported here suggest a very limited role for either germ-line or somatic DICER1 mutations in the etiology of TGCT. BioMed Central 2013-04-01 /pmc/articles/PMC3642033/ /pubmed/23547758 http://dx.doi.org/10.1186/1756-0500-6-127 Text en Copyright © 2013 Sabbaghian et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Report
Sabbaghian, Nelly
Bahubeshi, Amin
Shuen, Andrew Y
Kanetsky, Peter A
Tischkowitz, Marc D
Nathanson, Katherine L
Foulkes, William D
Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title_full Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title_fullStr Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title_full_unstemmed Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title_short Germ-line DICER1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
title_sort germ-line dicer1 mutations do not make a major contribution to the etiology of familial testicular germ cell tumours
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3642033/
https://www.ncbi.nlm.nih.gov/pubmed/23547758
http://dx.doi.org/10.1186/1756-0500-6-127
work_keys_str_mv AT sabbaghiannelly germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT bahubeshiamin germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT shuenandrewy germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT kanetskypetera germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT tischkowitzmarcd germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT nathansonkatherinel germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours
AT foulkeswilliamd germlinedicer1mutationsdonotmakeamajorcontributiontotheetiologyoffamilialtesticulargermcelltumours