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Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases

EngA is an essential protein involved in ribosome biogenesis. It is an unique GTPase, possessing two consecutive G-domains. Using sequence and phylogenetic analysis, we found two intriguing variants among EngA homologues – one with a shorter linker joining the G-domains and another with a longer lin...

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Detalles Bibliográficos
Autores principales: Tomar, Sushil Kumar, Kumar, Prashant, Majumdar, Soneya, Bhaskar, Varun, Dutta, Prasun, Prakash, Balaji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3642160/
https://www.ncbi.nlm.nih.gov/pubmed/23650599
http://dx.doi.org/10.1016/j.fob.2012.07.009
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author Tomar, Sushil Kumar
Kumar, Prashant
Majumdar, Soneya
Bhaskar, Varun
Dutta, Prasun
Prakash, Balaji
author_facet Tomar, Sushil Kumar
Kumar, Prashant
Majumdar, Soneya
Bhaskar, Varun
Dutta, Prasun
Prakash, Balaji
author_sort Tomar, Sushil Kumar
collection PubMed
description EngA is an essential protein involved in ribosome biogenesis. It is an unique GTPase, possessing two consecutive G-domains. Using sequence and phylogenetic analysis, we found two intriguing variants among EngA homologues – one with a shorter linker joining the G-domains and another with a longer linker, which additionally possesses an extended C-terminus. Interestingly, while the former variant is mainly restricted to firmicutes, the latter is found in nonfirmicutes. Chimeric proteins with interchanged linkers and extensions were generated to gauge the importance of these elements. Ribosome interaction experiments employing the chimeric proteins suggest that a precise combination of the linker and C-terminal extension are important features regulating EngA ribosome interactions in a variant-specific manner.
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spelling pubmed-36421602013-05-06 Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases Tomar, Sushil Kumar Kumar, Prashant Majumdar, Soneya Bhaskar, Varun Dutta, Prasun Prakash, Balaji FEBS Open Bio Article EngA is an essential protein involved in ribosome biogenesis. It is an unique GTPase, possessing two consecutive G-domains. Using sequence and phylogenetic analysis, we found two intriguing variants among EngA homologues – one with a shorter linker joining the G-domains and another with a longer linker, which additionally possesses an extended C-terminus. Interestingly, while the former variant is mainly restricted to firmicutes, the latter is found in nonfirmicutes. Chimeric proteins with interchanged linkers and extensions were generated to gauge the importance of these elements. Ribosome interaction experiments employing the chimeric proteins suggest that a precise combination of the linker and C-terminal extension are important features regulating EngA ribosome interactions in a variant-specific manner. Elsevier 2012-07-27 /pmc/articles/PMC3642160/ /pubmed/23650599 http://dx.doi.org/10.1016/j.fob.2012.07.009 Text en © 2012 Published by Elsevier B.V. on behalf of Federation of European Biochemical Societies. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-No Derivative Works License, which permits non- commercial use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Article
Tomar, Sushil Kumar
Kumar, Prashant
Majumdar, Soneya
Bhaskar, Varun
Dutta, Prasun
Prakash, Balaji
Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title_full Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title_fullStr Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title_full_unstemmed Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title_short Extended C-terminus and length of the linker connecting the G-domains are species-specific variations in the EngA family of GTPases
title_sort extended c-terminus and length of the linker connecting the g-domains are species-specific variations in the enga family of gtpases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3642160/
https://www.ncbi.nlm.nih.gov/pubmed/23650599
http://dx.doi.org/10.1016/j.fob.2012.07.009
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