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Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia
This study describes the community structure of the microbial eukaryotic community from hypersaline Lake Tyrrell, Australia, using near full length 18S rRNA sequences. Water samples were taken in both summer and winter over a 4-year period. The extent of eukaryotic diversity detected was low, with o...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651956/ https://www.ncbi.nlm.nih.gov/pubmed/23717306 http://dx.doi.org/10.3389/fmicb.2013.00115 |
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author | Heidelberg, Karla B. Nelson, William C. Holm, Johanna B. Eisenkolb, Nadine Andrade, Karen Emerson, Joanne B. |
author_facet | Heidelberg, Karla B. Nelson, William C. Holm, Johanna B. Eisenkolb, Nadine Andrade, Karen Emerson, Joanne B. |
author_sort | Heidelberg, Karla B. |
collection | PubMed |
description | This study describes the community structure of the microbial eukaryotic community from hypersaline Lake Tyrrell, Australia, using near full length 18S rRNA sequences. Water samples were taken in both summer and winter over a 4-year period. The extent of eukaryotic diversity detected was low, with only 35 unique phylotypes using a 97% sequence similarity threshold. The water samples were dominated (91%) by a novel cluster of the Alveolate, Apicomplexa Colpodella spp., most closely related to C. edax. The Chlorophyte, Dunaliella spp. accounted for less than 35% of water column samples. However, the eukaryotic community entrained in a salt crust sample was vastly different and was dominated (83%) by the Dunaliella spp. The patterns described here represent the first observation of microbial eukaryotic dynamics in this system and provide a multiyear comparison of community composition by season. The lack of expected seasonal distribution in eukaryotic communities paired with abundant nanoflagellates suggests that grazing may significantly structure microbial eukaryotic communities in this system. |
format | Online Article Text |
id | pubmed-3651956 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36519562013-05-28 Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia Heidelberg, Karla B. Nelson, William C. Holm, Johanna B. Eisenkolb, Nadine Andrade, Karen Emerson, Joanne B. Front Microbiol Microbiology This study describes the community structure of the microbial eukaryotic community from hypersaline Lake Tyrrell, Australia, using near full length 18S rRNA sequences. Water samples were taken in both summer and winter over a 4-year period. The extent of eukaryotic diversity detected was low, with only 35 unique phylotypes using a 97% sequence similarity threshold. The water samples were dominated (91%) by a novel cluster of the Alveolate, Apicomplexa Colpodella spp., most closely related to C. edax. The Chlorophyte, Dunaliella spp. accounted for less than 35% of water column samples. However, the eukaryotic community entrained in a salt crust sample was vastly different and was dominated (83%) by the Dunaliella spp. The patterns described here represent the first observation of microbial eukaryotic dynamics in this system and provide a multiyear comparison of community composition by season. The lack of expected seasonal distribution in eukaryotic communities paired with abundant nanoflagellates suggests that grazing may significantly structure microbial eukaryotic communities in this system. Frontiers Media S.A. 2013-05-13 /pmc/articles/PMC3651956/ /pubmed/23717306 http://dx.doi.org/10.3389/fmicb.2013.00115 Text en Copyright © 2013 Heidelberg, Nelson, Holm, Eisenkolb, Andrade and Emerson. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Microbiology Heidelberg, Karla B. Nelson, William C. Holm, Johanna B. Eisenkolb, Nadine Andrade, Karen Emerson, Joanne B. Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title | Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title_full | Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title_fullStr | Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title_full_unstemmed | Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title_short | Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia |
title_sort | characterization of eukaryotic microbial diversity in hypersaline lake tyrrell, australia |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651956/ https://www.ncbi.nlm.nih.gov/pubmed/23717306 http://dx.doi.org/10.3389/fmicb.2013.00115 |
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