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Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients
BACKGROUND: Smoothing methods are widely used to analyze epidemiologic data, particularly in the area of environmental health where non-linear relationships are not uncommon. This study focused on three different smoothing methods in Cox models: penalized splines, restricted cubic splines and fracti...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Kowsar
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3652506/ https://www.ncbi.nlm.nih.gov/pubmed/23682331 http://dx.doi.org/10.5812/ircmj.8649 |
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author | Noorkojuri, Hoda Hajizadeh, Ebrahim Baghestani, Ahmadreza Pourhoseingholi, Mohamadamin |
author_facet | Noorkojuri, Hoda Hajizadeh, Ebrahim Baghestani, Ahmadreza Pourhoseingholi, Mohamadamin |
author_sort | Noorkojuri, Hoda |
collection | PubMed |
description | BACKGROUND: Smoothing methods are widely used to analyze epidemiologic data, particularly in the area of environmental health where non-linear relationships are not uncommon. This study focused on three different smoothing methods in Cox models: penalized splines, restricted cubic splines and fractional polynomials. OBJECTIVES: The aim of this study was to assess the effects of prognostic factors on survival of patients with gastric cancer using the smoothing methods in Cox model and Cox proportional hazards. Also, all models were compared to each other in order to find the best one. MATERIALS AND METHODS: We retrospectively studied 216 patients with gastric cancer who were registered in one referral cancer registry center in Tehran, Iran. Age at diagnosis, sex, presence of metastasis, tumor size, histology type, lymph node metastasis, and pathologic stages were entered in to analysis using the Cox proportional hazards model and smoothing methods in Cox model. The SPSS version 18.0 and R version 2.14.1 were used for data analysis. These models compared with Akaike information criterion. RESULTS: In this study, The 5 year survival rate was 30%. The Cox proportional hazards, penalized spline and fractional polynomial models let to similar results and Akaike information criterion showed a better performance for these three models comparing to the restricted cubic spline. Also, P-value and likelihood ratio test in restricted cubic spline was greater than other models. Note that the best model is indicated by the lowest Akaike information criterion. CONCLUSIONS: The use of smoothing methods helps us to eliminate non-linear effects but it is more appropriate to use Cox proportional hazards model in medical data because of its’ ease of interpretation and capability of modeling both continuous and discrete covariates. Also, Cox proportional hazards model and smoothing methods analysis identified that age at diagnosis and tumor size were independent prognostic factors for the survival of patients with gastric cancer (P < 0.05). According to these results the early detection of patients at younger age and in primary stages may be important to increase survival. |
format | Online Article Text |
id | pubmed-3652506 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Kowsar |
record_format | MEDLINE/PubMed |
spelling | pubmed-36525062013-05-16 Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients Noorkojuri, Hoda Hajizadeh, Ebrahim Baghestani, Ahmadreza Pourhoseingholi, Mohamadamin Iran Red Crescent Med J Research Article BACKGROUND: Smoothing methods are widely used to analyze epidemiologic data, particularly in the area of environmental health where non-linear relationships are not uncommon. This study focused on three different smoothing methods in Cox models: penalized splines, restricted cubic splines and fractional polynomials. OBJECTIVES: The aim of this study was to assess the effects of prognostic factors on survival of patients with gastric cancer using the smoothing methods in Cox model and Cox proportional hazards. Also, all models were compared to each other in order to find the best one. MATERIALS AND METHODS: We retrospectively studied 216 patients with gastric cancer who were registered in one referral cancer registry center in Tehran, Iran. Age at diagnosis, sex, presence of metastasis, tumor size, histology type, lymph node metastasis, and pathologic stages were entered in to analysis using the Cox proportional hazards model and smoothing methods in Cox model. The SPSS version 18.0 and R version 2.14.1 were used for data analysis. These models compared with Akaike information criterion. RESULTS: In this study, The 5 year survival rate was 30%. The Cox proportional hazards, penalized spline and fractional polynomial models let to similar results and Akaike information criterion showed a better performance for these three models comparing to the restricted cubic spline. Also, P-value and likelihood ratio test in restricted cubic spline was greater than other models. Note that the best model is indicated by the lowest Akaike information criterion. CONCLUSIONS: The use of smoothing methods helps us to eliminate non-linear effects but it is more appropriate to use Cox proportional hazards model in medical data because of its’ ease of interpretation and capability of modeling both continuous and discrete covariates. Also, Cox proportional hazards model and smoothing methods analysis identified that age at diagnosis and tumor size were independent prognostic factors for the survival of patients with gastric cancer (P < 0.05). According to these results the early detection of patients at younger age and in primary stages may be important to increase survival. Kowsar 2013-02-05 2013-02 /pmc/articles/PMC3652506/ /pubmed/23682331 http://dx.doi.org/10.5812/ircmj.8649 Text en Copyright © 2013, Iranian Red Crescent Medical Journal http://creativecommons.org/licenses/by/3/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Noorkojuri, Hoda Hajizadeh, Ebrahim Baghestani, Ahmadreza Pourhoseingholi, Mohamadamin Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title | Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title_full | Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title_fullStr | Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title_full_unstemmed | Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title_short | Application of Smoothing Methods for Determining of the Effecting Factors on the Survival Rate of Gastric Cancer Patients |
title_sort | application of smoothing methods for determining of the effecting factors on the survival rate of gastric cancer patients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3652506/ https://www.ncbi.nlm.nih.gov/pubmed/23682331 http://dx.doi.org/10.5812/ircmj.8649 |
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