Cargando…

Altering physiological networks using drugs: steps towards personalized physiology

BACKGROUND: The rise of personalized medicine has reminded us that each patient must be treated as an individual. One factor in making treatment decisions is the physiological state of each patient, but definitions of relevant states and methods to visualize state-related physiologic changes are sca...

Descripción completa

Detalles Bibliográficos
Autores principales: Grossman, Adam D, Cohen, Mitchell J, Manley, Geoffrey T, Butte, Atul J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3654899/
https://www.ncbi.nlm.nih.gov/pubmed/23819503
http://dx.doi.org/10.1186/1755-8794-6-S2-S7
_version_ 1782269788692676608
author Grossman, Adam D
Cohen, Mitchell J
Manley, Geoffrey T
Butte, Atul J
author_facet Grossman, Adam D
Cohen, Mitchell J
Manley, Geoffrey T
Butte, Atul J
author_sort Grossman, Adam D
collection PubMed
description BACKGROUND: The rise of personalized medicine has reminded us that each patient must be treated as an individual. One factor in making treatment decisions is the physiological state of each patient, but definitions of relevant states and methods to visualize state-related physiologic changes are scarce. We constructed correlation networks from physiologic data to demonstrate changes associated with pressor use in the intensive care unit. METHODS: We collected 29 physiological variables at one-minute intervals from nineteen trauma patients in the intensive care unit of an academic hospital and grouped each minute of data as receiving or not receiving pressors. For each group we constructed Spearman correlation networks of pairs of physiologic variables. To visualize drug-associated changes we split the networks into three components: an unchanging network, a network of connections with changing correlation sign, and a network of connections only present in one group. RESULTS: Out of a possible 406 connections between the 29 physiological measures, 64, 39, and 48 were present in each of the three component networks. The static network confirms expected physiological relationships while the network of associations with changed correlation sign suggests putative changes due to the drugs. The network of associations present only with pressors suggests new relationships that could be worthy of study. CONCLUSIONS: We demonstrated that visualizing physiological relationships using correlation networks provides insight into underlying physiologic states while also showing that many of these relationships change when the state is defined by the presence of drugs. This method applied to targeted experiments could change the way critical care patients are monitored and treated.
format Online
Article
Text
id pubmed-3654899
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-36548992013-05-20 Altering physiological networks using drugs: steps towards personalized physiology Grossman, Adam D Cohen, Mitchell J Manley, Geoffrey T Butte, Atul J BMC Med Genomics Research BACKGROUND: The rise of personalized medicine has reminded us that each patient must be treated as an individual. One factor in making treatment decisions is the physiological state of each patient, but definitions of relevant states and methods to visualize state-related physiologic changes are scarce. We constructed correlation networks from physiologic data to demonstrate changes associated with pressor use in the intensive care unit. METHODS: We collected 29 physiological variables at one-minute intervals from nineteen trauma patients in the intensive care unit of an academic hospital and grouped each minute of data as receiving or not receiving pressors. For each group we constructed Spearman correlation networks of pairs of physiologic variables. To visualize drug-associated changes we split the networks into three components: an unchanging network, a network of connections with changing correlation sign, and a network of connections only present in one group. RESULTS: Out of a possible 406 connections between the 29 physiological measures, 64, 39, and 48 were present in each of the three component networks. The static network confirms expected physiological relationships while the network of associations with changed correlation sign suggests putative changes due to the drugs. The network of associations present only with pressors suggests new relationships that could be worthy of study. CONCLUSIONS: We demonstrated that visualizing physiological relationships using correlation networks provides insight into underlying physiologic states while also showing that many of these relationships change when the state is defined by the presence of drugs. This method applied to targeted experiments could change the way critical care patients are monitored and treated. BioMed Central 2013-05-07 /pmc/articles/PMC3654899/ /pubmed/23819503 http://dx.doi.org/10.1186/1755-8794-6-S2-S7 Text en Copyright © 2013 Grossman et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Grossman, Adam D
Cohen, Mitchell J
Manley, Geoffrey T
Butte, Atul J
Altering physiological networks using drugs: steps towards personalized physiology
title Altering physiological networks using drugs: steps towards personalized physiology
title_full Altering physiological networks using drugs: steps towards personalized physiology
title_fullStr Altering physiological networks using drugs: steps towards personalized physiology
title_full_unstemmed Altering physiological networks using drugs: steps towards personalized physiology
title_short Altering physiological networks using drugs: steps towards personalized physiology
title_sort altering physiological networks using drugs: steps towards personalized physiology
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3654899/
https://www.ncbi.nlm.nih.gov/pubmed/23819503
http://dx.doi.org/10.1186/1755-8794-6-S2-S7
work_keys_str_mv AT grossmanadamd alteringphysiologicalnetworksusingdrugsstepstowardspersonalizedphysiology
AT cohenmitchellj alteringphysiologicalnetworksusingdrugsstepstowardspersonalizedphysiology
AT manleygeoffreyt alteringphysiologicalnetworksusingdrugsstepstowardspersonalizedphysiology
AT butteatulj alteringphysiologicalnetworksusingdrugsstepstowardspersonalizedphysiology