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Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms
The aim of this study is to investigate the effects of sampling rate on Hurst exponents derived from Blood Oxygenation Level Dependent functional Magnetic Resonance Imaging (BOLD fMRI) resting state time series. fMRI measurements were performed on 2 human subjects and a selection of gel phantoms. Fr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3657634/ https://www.ncbi.nlm.nih.gov/pubmed/23730289 http://dx.doi.org/10.3389/fphys.2013.00106 |
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author | Mikkelsen, Kaare B. Lund, Torben E. |
author_facet | Mikkelsen, Kaare B. Lund, Torben E. |
author_sort | Mikkelsen, Kaare B. |
collection | PubMed |
description | The aim of this study is to investigate the effects of sampling rate on Hurst exponents derived from Blood Oxygenation Level Dependent functional Magnetic Resonance Imaging (BOLD fMRI) resting state time series. fMRI measurements were performed on 2 human subjects and a selection of gel phantoms. From these, Hurst exponents were calculated. It was found that low sampling rates induced non-trivial exponents at sharp material transitions, and that Hurst exponents of human measurements had a strong TR-dependence. The findings are compared to theoretical considerations regarding the fractional Gaussian noise model and resampling, and it is found that the implications are problematic. This result should have a direct influence on the way future studies of low-frequency variation in BOLD fMRI data are conducted, especially if the fractional Gaussian noise model is considered. We recommend either using a different model (examples of such are referenced in the conclusion), or standardizing experimental procedures along an optimal sampling rate. |
format | Online Article Text |
id | pubmed-3657634 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36576342013-05-31 Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms Mikkelsen, Kaare B. Lund, Torben E. Front Physiol Physiology The aim of this study is to investigate the effects of sampling rate on Hurst exponents derived from Blood Oxygenation Level Dependent functional Magnetic Resonance Imaging (BOLD fMRI) resting state time series. fMRI measurements were performed on 2 human subjects and a selection of gel phantoms. From these, Hurst exponents were calculated. It was found that low sampling rates induced non-trivial exponents at sharp material transitions, and that Hurst exponents of human measurements had a strong TR-dependence. The findings are compared to theoretical considerations regarding the fractional Gaussian noise model and resampling, and it is found that the implications are problematic. This result should have a direct influence on the way future studies of low-frequency variation in BOLD fMRI data are conducted, especially if the fractional Gaussian noise model is considered. We recommend either using a different model (examples of such are referenced in the conclusion), or standardizing experimental procedures along an optimal sampling rate. Frontiers Media S.A. 2013-05-20 /pmc/articles/PMC3657634/ /pubmed/23730289 http://dx.doi.org/10.3389/fphys.2013.00106 Text en Copyright © 2013 Mikkelsen and Lund. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Physiology Mikkelsen, Kaare B. Lund, Torben E. Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title | Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title_full | Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title_fullStr | Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title_full_unstemmed | Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title_short | Sampling rate dependence of correlation at long time lags in BOLD fMRI measurements on humans and gel phantoms |
title_sort | sampling rate dependence of correlation at long time lags in bold fmri measurements on humans and gel phantoms |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3657634/ https://www.ncbi.nlm.nih.gov/pubmed/23730289 http://dx.doi.org/10.3389/fphys.2013.00106 |
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