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Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images
This work addresses the problem of recovering multi-echo T1 or T2 weighted images from their partial K-space scans. Recent studies have shown that the best results are obtained when all the multi-echo images are reconstructed by simultaneously exploiting their intra-image spatial redundancy and inte...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3658782/ https://www.ncbi.nlm.nih.gov/pubmed/23519348 http://dx.doi.org/10.3390/s130303902 |
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author | Majumdar, Angshul Ward, Rabab |
author_facet | Majumdar, Angshul Ward, Rabab |
author_sort | Majumdar, Angshul |
collection | PubMed |
description | This work addresses the problem of recovering multi-echo T1 or T2 weighted images from their partial K-space scans. Recent studies have shown that the best results are obtained when all the multi-echo images are reconstructed by simultaneously exploiting their intra-image spatial redundancy and inter-echo correlation. The aforesaid studies either stack the vectorised images (formed by row or columns concatenation) as columns of a Multiple Measurement Vector (MMV) matrix or concatenate them as a long vector. Owing to the inter-image correlation, the thus formed MMV matrix or the long concatenated vector is row-sparse or group-sparse respectively in a transform domain (wavelets). Consequently the reconstruction problem was formulated as a row-sparse MMV recovery or a group-sparse vector recovery. In this work we show that when the multi-echo images are arranged in the MMV form, the thus formed matrix is low-rank. We show that better reconstruction accuracy can be obtained when the information about rank-deficiency is incorporated into the row/group sparse recovery problem. Mathematically, this leads to a constrained optimization problem where the objective function promotes the signal's groups-sparsity as well as its rank-deficiency; the objective function is minimized subject to data fidelity constraints. The experiments were carried out on ex vivo and in vivo T2 weighted images of a rat's spinal cord. Results show that this method yields considerably superior results than state-of-the-art reconstruction techniques. |
format | Online Article Text |
id | pubmed-3658782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-36587822013-05-30 Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images Majumdar, Angshul Ward, Rabab Sensors (Basel) Communication This work addresses the problem of recovering multi-echo T1 or T2 weighted images from their partial K-space scans. Recent studies have shown that the best results are obtained when all the multi-echo images are reconstructed by simultaneously exploiting their intra-image spatial redundancy and inter-echo correlation. The aforesaid studies either stack the vectorised images (formed by row or columns concatenation) as columns of a Multiple Measurement Vector (MMV) matrix or concatenate them as a long vector. Owing to the inter-image correlation, the thus formed MMV matrix or the long concatenated vector is row-sparse or group-sparse respectively in a transform domain (wavelets). Consequently the reconstruction problem was formulated as a row-sparse MMV recovery or a group-sparse vector recovery. In this work we show that when the multi-echo images are arranged in the MMV form, the thus formed matrix is low-rank. We show that better reconstruction accuracy can be obtained when the information about rank-deficiency is incorporated into the row/group sparse recovery problem. Mathematically, this leads to a constrained optimization problem where the objective function promotes the signal's groups-sparsity as well as its rank-deficiency; the objective function is minimized subject to data fidelity constraints. The experiments were carried out on ex vivo and in vivo T2 weighted images of a rat's spinal cord. Results show that this method yields considerably superior results than state-of-the-art reconstruction techniques. Molecular Diversity Preservation International (MDPI) 2013-03-20 /pmc/articles/PMC3658782/ /pubmed/23519348 http://dx.doi.org/10.3390/s130303902 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Communication Majumdar, Angshul Ward, Rabab Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title | Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title_full | Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title_fullStr | Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title_full_unstemmed | Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title_short | Rank Awareness in Group-Sparse Recovery of Multi-Echo MR Images |
title_sort | rank awareness in group-sparse recovery of multi-echo mr images |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3658782/ https://www.ncbi.nlm.nih.gov/pubmed/23519348 http://dx.doi.org/10.3390/s130303902 |
work_keys_str_mv | AT majumdarangshul rankawarenessingroupsparserecoveryofmultiechomrimages AT wardrabab rankawarenessingroupsparserecoveryofmultiechomrimages |