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The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods
Habitat loss and fragmentation are imminent threats to biological diversity worldwide and thus are fundamental issues in conservation biology. Increased isolation alone has been implicated as a driver of negative impacts in populations associated with fragmented landscapes. Genetic monitoring and th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3660580/ https://www.ncbi.nlm.nih.gov/pubmed/23704965 http://dx.doi.org/10.1371/journal.pone.0063981 |
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author | Lloyd, Michael W. Campbell, Lesley Neel, Maile C. |
author_facet | Lloyd, Michael W. Campbell, Lesley Neel, Maile C. |
author_sort | Lloyd, Michael W. |
collection | PubMed |
description | Habitat loss and fragmentation are imminent threats to biological diversity worldwide and thus are fundamental issues in conservation biology. Increased isolation alone has been implicated as a driver of negative impacts in populations associated with fragmented landscapes. Genetic monitoring and the use of measures of genetic divergence have been proposed as means to detect changes in landscape connectivity. Our goal was to evaluate the sensitivity of Wright’s F (st), Hedrick’ G’(st), Sherwin’s MI, and Jost’s D to recent fragmentation events across a range of population sizes and sampling regimes. We constructed an individual-based model, which used a factorial design to compare effects of varying population size, presence or absence of overlapping generations, and presence or absence of population sub-structuring. Increases in population size, overlapping generations, and population sub-structuring each reduced F (st), G’(st), MI, and D. The signal of fragmentation was detected within two generations for all metrics. However, the magnitude of the change in each was small in all cases, and when N (e) was >100 individuals it was extremely small. Multi-generational sampling and population estimates are required to differentiate the signal of background divergence from changes in F(st), G’(st), MI, and D associated with fragmentation. Finally, the window during which rapid change in F(st), G’(st), MI, and D between generations occurs can be small, and if missed would lead to inconclusive results. For these reasons, use of F (st), G’(st), MI, or D for detecting and monitoring changes in connectivity is likely to prove difficult in real-world scenarios. We advocate use of genetic monitoring only in conjunction with estimates of actual movement among patches such that one could compare current movement with the genetic signature of past movement to determine there has been a change. |
format | Online Article Text |
id | pubmed-3660580 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-36605802013-05-23 The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods Lloyd, Michael W. Campbell, Lesley Neel, Maile C. PLoS One Research Article Habitat loss and fragmentation are imminent threats to biological diversity worldwide and thus are fundamental issues in conservation biology. Increased isolation alone has been implicated as a driver of negative impacts in populations associated with fragmented landscapes. Genetic monitoring and the use of measures of genetic divergence have been proposed as means to detect changes in landscape connectivity. Our goal was to evaluate the sensitivity of Wright’s F (st), Hedrick’ G’(st), Sherwin’s MI, and Jost’s D to recent fragmentation events across a range of population sizes and sampling regimes. We constructed an individual-based model, which used a factorial design to compare effects of varying population size, presence or absence of overlapping generations, and presence or absence of population sub-structuring. Increases in population size, overlapping generations, and population sub-structuring each reduced F (st), G’(st), MI, and D. The signal of fragmentation was detected within two generations for all metrics. However, the magnitude of the change in each was small in all cases, and when N (e) was >100 individuals it was extremely small. Multi-generational sampling and population estimates are required to differentiate the signal of background divergence from changes in F(st), G’(st), MI, and D associated with fragmentation. Finally, the window during which rapid change in F(st), G’(st), MI, and D between generations occurs can be small, and if missed would lead to inconclusive results. For these reasons, use of F (st), G’(st), MI, or D for detecting and monitoring changes in connectivity is likely to prove difficult in real-world scenarios. We advocate use of genetic monitoring only in conjunction with estimates of actual movement among patches such that one could compare current movement with the genetic signature of past movement to determine there has been a change. Public Library of Science 2013-05-21 /pmc/articles/PMC3660580/ /pubmed/23704965 http://dx.doi.org/10.1371/journal.pone.0063981 Text en © 2013 Lloyd et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Lloyd, Michael W. Campbell, Lesley Neel, Maile C. The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title | The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title_full | The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title_fullStr | The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title_full_unstemmed | The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title_short | The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods |
title_sort | power to detect recent fragmentation events using genetic differentiation methods |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3660580/ https://www.ncbi.nlm.nih.gov/pubmed/23704965 http://dx.doi.org/10.1371/journal.pone.0063981 |
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