Cargando…

Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data

OBJECTIVES: Obesity as measured by body mass index (BMI) is one of the major risk factors for osteoarthritis. In addition, genetic overlap has been reported between osteoarthritis and normal adult height variation. We investigated whether this relationship is due to a shared genetic aetiology on a g...

Descripción completa

Detalles Bibliográficos
Autores principales: Elliott, Katherine S, Chapman, Kay, Day-Williams, Aaron, Panoutsopoulou, Kalliope, Southam, Lorraine, Lindgren, Cecilia M, Arden, Nigel, Aslam, Nadim, Birrell, Fraser, Carluke, Ian, Carr, Andrew, Deloukas, Panos, Doherty, Michael, Loughlin, John, McCaskie, Andrew, Ollier, William E R, Rai, Ashok, Ralston, Stuart, Reed, Mike R, Spector, Timothy D, Valdes, Ana M, Wallis, Gillian A, Wilkinson, Mark, Zeggini, Eleftheria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3664369/
https://www.ncbi.nlm.nih.gov/pubmed/22956599
http://dx.doi.org/10.1136/annrheumdis-2012-202081
_version_ 1782271089695522816
author Elliott, Katherine S
Chapman, Kay
Day-Williams, Aaron
Panoutsopoulou, Kalliope
Southam, Lorraine
Lindgren, Cecilia M
Arden, Nigel
Aslam, Nadim
Birrell, Fraser
Carluke, Ian
Carr, Andrew
Deloukas, Panos
Doherty, Michael
Loughlin, John
McCaskie, Andrew
Ollier, William E R
Rai, Ashok
Ralston, Stuart
Reed, Mike R
Spector, Timothy D
Valdes, Ana M
Wallis, Gillian A
Wilkinson, Mark
Zeggini, Eleftheria
author_facet Elliott, Katherine S
Chapman, Kay
Day-Williams, Aaron
Panoutsopoulou, Kalliope
Southam, Lorraine
Lindgren, Cecilia M
Arden, Nigel
Aslam, Nadim
Birrell, Fraser
Carluke, Ian
Carr, Andrew
Deloukas, Panos
Doherty, Michael
Loughlin, John
McCaskie, Andrew
Ollier, William E R
Rai, Ashok
Ralston, Stuart
Reed, Mike R
Spector, Timothy D
Valdes, Ana M
Wallis, Gillian A
Wilkinson, Mark
Zeggini, Eleftheria
author_sort Elliott, Katherine S
collection PubMed
description OBJECTIVES: Obesity as measured by body mass index (BMI) is one of the major risk factors for osteoarthritis. In addition, genetic overlap has been reported between osteoarthritis and normal adult height variation. We investigated whether this relationship is due to a shared genetic aetiology on a genome-wide scale. METHODS: We compared genetic association summary statistics (effect size, p value) for BMI and height from the GIANT consortium genome-wide association study (GWAS) with genetic association summary statistics from the arcOGEN consortium osteoarthritis GWAS. Significance was evaluated by permutation. Replication of osteoarthritis association of the highlighted signals was investigated in an independent dataset. Phenotypic information of height and BMI was accounted for in a separate analysis using osteoarthritis-free controls. RESULTS: We found significant overlap between osteoarthritis and height (p=3.3×10(−5) for signals with p≤0.05) when the GIANT and arcOGEN GWAS were compared. For signals with p≤0.001 we found 17 shared signals between osteoarthritis and height and four between osteoarthritis and BMI. However, only one of the height or BMI signals that had shown evidence of association with osteoarthritis in the arcOGEN GWAS was also associated with osteoarthritis in the independent dataset: rs12149832, within the FTO gene (combined p=2.3×10(−5)). As expected, this signal was attenuated when we adjusted for BMI. CONCLUSIONS: We found a significant excess of shared signals between both osteoarthritis and height and osteoarthritis and BMI, suggestive of a common genetic aetiology. However, only one signal showed association with osteoarthritis when followed up in a new dataset.
format Online
Article
Text
id pubmed-3664369
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher BMJ Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-36643692013-05-31 Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data Elliott, Katherine S Chapman, Kay Day-Williams, Aaron Panoutsopoulou, Kalliope Southam, Lorraine Lindgren, Cecilia M Arden, Nigel Aslam, Nadim Birrell, Fraser Carluke, Ian Carr, Andrew Deloukas, Panos Doherty, Michael Loughlin, John McCaskie, Andrew Ollier, William E R Rai, Ashok Ralston, Stuart Reed, Mike R Spector, Timothy D Valdes, Ana M Wallis, Gillian A Wilkinson, Mark Zeggini, Eleftheria Ann Rheum Dis Clinical and Epidemiological Research OBJECTIVES: Obesity as measured by body mass index (BMI) is one of the major risk factors for osteoarthritis. In addition, genetic overlap has been reported between osteoarthritis and normal adult height variation. We investigated whether this relationship is due to a shared genetic aetiology on a genome-wide scale. METHODS: We compared genetic association summary statistics (effect size, p value) for BMI and height from the GIANT consortium genome-wide association study (GWAS) with genetic association summary statistics from the arcOGEN consortium osteoarthritis GWAS. Significance was evaluated by permutation. Replication of osteoarthritis association of the highlighted signals was investigated in an independent dataset. Phenotypic information of height and BMI was accounted for in a separate analysis using osteoarthritis-free controls. RESULTS: We found significant overlap between osteoarthritis and height (p=3.3×10(−5) for signals with p≤0.05) when the GIANT and arcOGEN GWAS were compared. For signals with p≤0.001 we found 17 shared signals between osteoarthritis and height and four between osteoarthritis and BMI. However, only one of the height or BMI signals that had shown evidence of association with osteoarthritis in the arcOGEN GWAS was also associated with osteoarthritis in the independent dataset: rs12149832, within the FTO gene (combined p=2.3×10(−5)). As expected, this signal was attenuated when we adjusted for BMI. CONCLUSIONS: We found a significant excess of shared signals between both osteoarthritis and height and osteoarthritis and BMI, suggestive of a common genetic aetiology. However, only one signal showed association with osteoarthritis when followed up in a new dataset. BMJ Publishing Group 2013-06 2012-09-06 /pmc/articles/PMC3664369/ /pubmed/22956599 http://dx.doi.org/10.1136/annrheumdis-2012-202081 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited, the use is non commercial and is otherwise in compliance with the license. See: http://creativecommons.org/licenses/by-nc/3.0/ and http://creativecommons.org/licenses/by-nc/3.0/legalcode
spellingShingle Clinical and Epidemiological Research
Elliott, Katherine S
Chapman, Kay
Day-Williams, Aaron
Panoutsopoulou, Kalliope
Southam, Lorraine
Lindgren, Cecilia M
Arden, Nigel
Aslam, Nadim
Birrell, Fraser
Carluke, Ian
Carr, Andrew
Deloukas, Panos
Doherty, Michael
Loughlin, John
McCaskie, Andrew
Ollier, William E R
Rai, Ashok
Ralston, Stuart
Reed, Mike R
Spector, Timothy D
Valdes, Ana M
Wallis, Gillian A
Wilkinson, Mark
Zeggini, Eleftheria
Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title_full Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title_fullStr Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title_full_unstemmed Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title_short Evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
title_sort evaluation of the genetic overlap between osteoarthritis with body mass index and height using genome-wide association scan data
topic Clinical and Epidemiological Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3664369/
https://www.ncbi.nlm.nih.gov/pubmed/22956599
http://dx.doi.org/10.1136/annrheumdis-2012-202081
work_keys_str_mv AT elliottkatherines evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT chapmankay evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT daywilliamsaaron evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT panoutsopouloukalliope evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT southamlorraine evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT lindgrenceciliam evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT ardennigel evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT aslamnadim evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT birrellfraser evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT carlukeian evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT carrandrew evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT deloukaspanos evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT dohertymichael evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT loughlinjohn evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT mccaskieandrew evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT ollierwilliamer evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT raiashok evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT ralstonstuart evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT reedmiker evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT spectortimothyd evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT valdesanam evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT wallisgilliana evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT wilkinsonmark evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata
AT zegginieleftheria evaluationofthegeneticoverlapbetweenosteoarthritiswithbodymassindexandheightusinggenomewideassociationscandata