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Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis

BACKGROUND: The genus Camellia, belonging to the family Theaceae, is economically important group in flowering plants. Frequent interspecific hybridization together with polyploidization has made them become taxonomically “difficult taxa”. The DNA content is often used to measure genome size variati...

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Autores principales: Huang, Hui, Tong, Yan, Zhang, Qun-Jie, Gao, Li-Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3664571/
https://www.ncbi.nlm.nih.gov/pubmed/23724111
http://dx.doi.org/10.1371/journal.pone.0064981
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author Huang, Hui
Tong, Yan
Zhang, Qun-Jie
Gao, Li-Zhi
author_facet Huang, Hui
Tong, Yan
Zhang, Qun-Jie
Gao, Li-Zhi
author_sort Huang, Hui
collection PubMed
description BACKGROUND: The genus Camellia, belonging to the family Theaceae, is economically important group in flowering plants. Frequent interspecific hybridization together with polyploidization has made them become taxonomically “difficult taxa”. The DNA content is often used to measure genome size variation and has largely advanced our understanding of plant evolution and genome variation. The goals of this study were to investigate patterns of interspecific and intraspecific variation of DNA contents and further explore genome size evolution in a phylogenetic context of the genus. METHODOLOGY/PRINCIPAL FINDINGS: The DNA amount in the genus was determined by using propidium iodide flow cytometry analysis for a total of 139 individual plants representing almost all sections of the two subgenera, Camellia and Thea. An improved WPB buffer was proven to be suitable for the Camellia species, which was able to counteract the negative effects of secondary metabolite and generated high-quality results with low coefficient of variation values (CV) <5%. Our results showed trivial effects on different tissues of flowers, leaves and buds as well as cytosolic compounds on the estimation of DNA amount. The DNA content of C. sinensis var. assamica was estimated to be 1C = 3.01 pg by flow cytometric analysis, which is equal to a genome size of about 2940 Mb. CONCLUSION: Intraspecific and interspecific variations were observed in the genus Camellia, and as expected, the latter was larger than the former. Our study suggests a directional trend of increasing genome size in the genus Camellia probably owing to the frequent polyploidization events.
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spelling pubmed-36645712013-05-30 Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis Huang, Hui Tong, Yan Zhang, Qun-Jie Gao, Li-Zhi PLoS One Research Article BACKGROUND: The genus Camellia, belonging to the family Theaceae, is economically important group in flowering plants. Frequent interspecific hybridization together with polyploidization has made them become taxonomically “difficult taxa”. The DNA content is often used to measure genome size variation and has largely advanced our understanding of plant evolution and genome variation. The goals of this study were to investigate patterns of interspecific and intraspecific variation of DNA contents and further explore genome size evolution in a phylogenetic context of the genus. METHODOLOGY/PRINCIPAL FINDINGS: The DNA amount in the genus was determined by using propidium iodide flow cytometry analysis for a total of 139 individual plants representing almost all sections of the two subgenera, Camellia and Thea. An improved WPB buffer was proven to be suitable for the Camellia species, which was able to counteract the negative effects of secondary metabolite and generated high-quality results with low coefficient of variation values (CV) <5%. Our results showed trivial effects on different tissues of flowers, leaves and buds as well as cytosolic compounds on the estimation of DNA amount. The DNA content of C. sinensis var. assamica was estimated to be 1C = 3.01 pg by flow cytometric analysis, which is equal to a genome size of about 2940 Mb. CONCLUSION: Intraspecific and interspecific variations were observed in the genus Camellia, and as expected, the latter was larger than the former. Our study suggests a directional trend of increasing genome size in the genus Camellia probably owing to the frequent polyploidization events. Public Library of Science 2013-05-27 /pmc/articles/PMC3664571/ /pubmed/23724111 http://dx.doi.org/10.1371/journal.pone.0064981 Text en © 2013 Huang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Huang, Hui
Tong, Yan
Zhang, Qun-Jie
Gao, Li-Zhi
Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title_full Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title_fullStr Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title_full_unstemmed Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title_short Genome Size Variation among and within Camellia Species by Using Flow Cytometric Analysis
title_sort genome size variation among and within camellia species by using flow cytometric analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3664571/
https://www.ncbi.nlm.nih.gov/pubmed/23724111
http://dx.doi.org/10.1371/journal.pone.0064981
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AT tongyan genomesizevariationamongandwithincamelliaspeciesbyusingflowcytometricanalysis
AT zhangqunjie genomesizevariationamongandwithincamelliaspeciesbyusingflowcytometricanalysis
AT gaolizhi genomesizevariationamongandwithincamelliaspeciesbyusingflowcytometricanalysis