Cargando…

Targeted chromosomal deletions and inversions in zebrafish

Zinc finger nucleases (ZFNs) and transcription activator-like effector nucleases (TALENs) provide powerful platforms for genome editing in plants and animals. Typically, a single nuclease is sufficient to disrupt the function of protein-coding genes through the introduction of microdeletions or inse...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gupta, Ankit, Hall, Victoria L., Kok, Fatma O., Shin, Masahiro, McNulty, Joseph C., Lawson, Nathan D., Wolfe, Scot A.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2013
Materias:	Method
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3668355/ https://www.ncbi.nlm.nih.gov/pubmed/23478401 http://dx.doi.org/10.1101/gr.154070.112

Ejemplares similares

Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish
por: Xiao, An, et al.
Publicado: (2013)

A simple strategy for heritable chromosomal deletions in zebrafish via the combinatorial action of targeting nucleases
por: Lim, Shimin, et al.
Publicado: (2013)

Genomic deletion induced by Tol2 transposon excision in zebrafish
por: Huang, Peng, et al.
Publicado: (2013)

Mapping the pericentric heterochromatin by comparative genomic hybridization analysis and chromosome deletions in Drosophila melanogaster
por: He, Bing, et al.
Publicado: (2012)

A modified bacterial one-hybrid system yields improved quantitative models of transcription factor specificity
por: Christensen, Ryan G., et al.
Publicado: (2011)

Zinc finger protein-dependent and -independent contributions to the in vivo off-target activity of zinc finger nucleases
por: Gupta, Ankit, et al.
Publicado: (2011)

Efficient targeted mutagenesis in the monarch butterfly using zinc-finger nucleases
por: Merlin, Christine, et al.
Publicado: (2013)

Prenatal diagnosis of sex chromosomal inversion, translocation and deletion
por: Zhang, Lin, et al.
Publicado: (2018)

Targeted germ line disruptions reveal general and species-specific roles for paralog group 1 hox genes in zebrafish
por: Weicksel, Steven E, et al.
Publicado: (2014)

Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation
por: Hiatt, Joseph B., et al.
Publicado: (2013)

High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9
por: Varshney, Gaurav K., et al.
Publicado: (2015)

Characterizing polymorphic inversions in human genomes by single-cell sequencing
por: Sanders, Ashley D., et al.
Publicado: (2016)

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8
por: Shin, GiWon, et al.
Publicado: (2021)

Targeted recombination of homologous chromosomes using CRISPR‐Cas9
por: Son, Wonseok, et al.
Publicado: (2023)

Automated staging of zebrafish embryos with deep learning
por: Jones, Rebecca A, et al.
Publicado: (2023)

Analysis of molecular inversion probe performance for allele copy number determination
por: Wang, Yuker, et al.
Publicado: (2007)

Determining the impact of uncharacterized inversions in the human genome by droplet digital PCR
por: Puig, Marta, et al.
Publicado: (2020)

A simple and effective chromosome modification method for large-scale deletion of genome sequences and identification of essential genes in fission yeast
por: Hirashima, Kyotaro, et al.
Publicado: (2006)

A major zebrafish polymorphism resource for genetic mapping
por: Bradley, Kevin M, et al.
Publicado: (2007)

Efficient knock-in method enabling lineage tracing in zebrafish
por: Mi, Jiarui, et al.
Publicado: (2023)

Acute Uterine Inversion: A Simple Modification of Hydrostatic Method of Treatment
por: Gupta, P, et al.
Publicado: (2014)

Simplifying the synthesis of carbon inverse opals
por: McNulty, David, et al.
Publicado: (2020)

Enhanced Cas12a editing in mammalian cells and zebrafish
por: Liu, Pengpeng, et al.
Publicado: (2019)

Enhancing CRISPR deletion via pharmacological delay of DNA-PKcs
por: Bosch-Guiteras, Núria, et al.
Publicado: (2021)

RAD marker microarrays enable rapid mapping of zebrafish mutations
por: Miller, Michael R, et al.
Publicado: (2007)

Zebrafish promoter microarrays identify actively transcribed embryonic genes
por: Wardle, Fiona C, et al.
Publicado: (2006)

Creation of targeted genomic deletions using TALEN or CRISPR/Cas nuclease pairs in one-cell mouse embryos
por: Brandl, Christina, et al.
Publicado: (2014)

PhaseDancer: a novel targeted assembler of segmental duplications unravels the complexity of the human chromosome 2 fusion going from 48 to 46 chromosomes in hominin evolution
por: Poszewiecka, Barbara, et al.
Publicado: (2023)

The origin, global distribution, and functional impact of the human 8p23 inversion polymorphism
por: Salm, Maximilian P.A., et al.
Publicado: (2012)

Ribosomal stalling landscapes revealed by high-throughput inverse toeprinting of mRNA libraries
por: Seip, Britta, et al.
Publicado: (2018)

Noninvasive recording of electrocardiogram in conscious rat: A new device
por: Kumar, Pradeep, et al.
Publicado: (2017)

Global fitness profiling of fission yeast deletion strains by barcode sequencing
por: Han, Tian Xu, et al.
Publicado: (2010)

Bad Clade Deletion Supertrees: A Fast and Accurate Supertree Algorithm
por: Fleischauer, Markus, et al.
Publicado: (2017)

TAD fusion score: discovery and ranking the contribution of deletions to genome structure
por: Huynh, Linh, et al.
Publicado: (2019)

A Probabilistic Model for Indel Evolution: Differentiating Insertions from Deletions
por: Loewenthal, Gil, et al.
Publicado: (2021)

Highly efficient gene knockout in mice and zebrafish with RNA-guided endonucleases
por: Sung, Young Hoon, et al.
Publicado: (2014)

Profiling the DNA-binding specificities of engineered Cys2His2 zinc finger domains using a rapid cell-based method
por: Meng, Xiangdong, et al.
Publicado: (2007)

A reverse genetic screen in Drosophila using a deletion-inducing mutagen
por: Nairz, Knud, et al.
Publicado: (2004)

A multi-task graph-clustering approach for chromosome conformation capture data sets identifies conserved modules of chromosomal interactions
por: Fotuhi Siahpirani, Alireza, et al.
Publicado: (2016)

Targeted nanopore sequencing enables complete characterisation of structural deletions initially identified using exon‐based short‐read sequencing strategies
por: McClinton, Benjamin, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_k6pf4ra2v0rj77h4pg6oimsdcf