Cargando…
Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling
Establishing the severity of hypoxic insult during the delivery of a neonate is key step in the determining the type of therapy administered. While successful therapy is present, current methods for assessing hypoxic injuries in the neonate are limited. Urine Nuclear Magnetic Resonance (NMR) metabol...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3669348/ https://www.ncbi.nlm.nih.gov/pubmed/23741447 http://dx.doi.org/10.1371/journal.pone.0065035 |
_version_ | 1782271738619363328 |
---|---|
author | Skappak, Christopher Regush, Shana Cheung, Po-Yin Adamko, Darryl J. |
author_facet | Skappak, Christopher Regush, Shana Cheung, Po-Yin Adamko, Darryl J. |
author_sort | Skappak, Christopher |
collection | PubMed |
description | Establishing the severity of hypoxic insult during the delivery of a neonate is key step in the determining the type of therapy administered. While successful therapy is present, current methods for assessing hypoxic injuries in the neonate are limited. Urine Nuclear Magnetic Resonance (NMR) metabolomics allows for the rapid non-invasive assessment of a multitude breakdown products of physiological processes. In a newborn piglet model of hypoxia, we used NMR spectroscopy to determine the levels of metabolites in urine samples, which were correlated with physiological measurements. Using PLS-DA analysis, we identified 13 urinary metabolites that differentiated hypoxic versus nonhypoxic animals (1-methylnicotinamide, 2-oxoglutarate, alanine, asparagine, betaine, citrate, creatine, fumarate, hippurate, lactate, N-acetylglycine, N-carbamoyl-β-alanine, and valine). Using this metabolomic profile, we then were able to blindly identify hypoxic animals correctly 84% of the time compared to nonhypoxic controls. This was better than using physiologic measures alone. Metabolomic profiling of urine has potential for identifying neonates that have undergone episodes of hypoxia. |
format | Online Article Text |
id | pubmed-3669348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-36693482013-06-05 Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling Skappak, Christopher Regush, Shana Cheung, Po-Yin Adamko, Darryl J. PLoS One Research Article Establishing the severity of hypoxic insult during the delivery of a neonate is key step in the determining the type of therapy administered. While successful therapy is present, current methods for assessing hypoxic injuries in the neonate are limited. Urine Nuclear Magnetic Resonance (NMR) metabolomics allows for the rapid non-invasive assessment of a multitude breakdown products of physiological processes. In a newborn piglet model of hypoxia, we used NMR spectroscopy to determine the levels of metabolites in urine samples, which were correlated with physiological measurements. Using PLS-DA analysis, we identified 13 urinary metabolites that differentiated hypoxic versus nonhypoxic animals (1-methylnicotinamide, 2-oxoglutarate, alanine, asparagine, betaine, citrate, creatine, fumarate, hippurate, lactate, N-acetylglycine, N-carbamoyl-β-alanine, and valine). Using this metabolomic profile, we then were able to blindly identify hypoxic animals correctly 84% of the time compared to nonhypoxic controls. This was better than using physiologic measures alone. Metabolomic profiling of urine has potential for identifying neonates that have undergone episodes of hypoxia. Public Library of Science 2013-05-31 /pmc/articles/PMC3669348/ /pubmed/23741447 http://dx.doi.org/10.1371/journal.pone.0065035 Text en © 2013 Skappak et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Skappak, Christopher Regush, Shana Cheung, Po-Yin Adamko, Darryl J. Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title | Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title_full | Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title_fullStr | Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title_full_unstemmed | Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title_short | Identifying Hypoxia in a Newborn Piglet Model Using Urinary NMR Metabolomic Profiling |
title_sort | identifying hypoxia in a newborn piglet model using urinary nmr metabolomic profiling |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3669348/ https://www.ncbi.nlm.nih.gov/pubmed/23741447 http://dx.doi.org/10.1371/journal.pone.0065035 |
work_keys_str_mv | AT skappakchristopher identifyinghypoxiainanewbornpigletmodelusingurinarynmrmetabolomicprofiling AT regushshana identifyinghypoxiainanewbornpigletmodelusingurinarynmrmetabolomicprofiling AT cheungpoyin identifyinghypoxiainanewbornpigletmodelusingurinarynmrmetabolomicprofiling AT adamkodarrylj identifyinghypoxiainanewbornpigletmodelusingurinarynmrmetabolomicprofiling |