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Toward 959 nematode genomes

The sequencing of the complete genome of the nematode Caenorhabditis elegans was a landmark achievement and ushered in a new era of whole-organism, systems analyses of the biology of this powerful model organism. The success of the C. elegans genome sequencing project also inspired communities worki...

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Autores principales: Kumar, Sujai, Koutsovoulos, Georgios, Kaur, Gaganjot, Blaxter, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Landes Bioscience 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3670170/
https://www.ncbi.nlm.nih.gov/pubmed/24058822
http://dx.doi.org/10.4161/worm.19046
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author Kumar, Sujai
Koutsovoulos, Georgios
Kaur, Gaganjot
Blaxter, Mark
author_facet Kumar, Sujai
Koutsovoulos, Georgios
Kaur, Gaganjot
Blaxter, Mark
author_sort Kumar, Sujai
collection PubMed
description The sequencing of the complete genome of the nematode Caenorhabditis elegans was a landmark achievement and ushered in a new era of whole-organism, systems analyses of the biology of this powerful model organism. The success of the C. elegans genome sequencing project also inspired communities working on other organisms to approach genome sequencing of their species. The phylum Nematoda is rich and diverse and of interest to a wide range of research fields from basic biology through ecology and parasitic disease. For all these communities, it is now clear that access to genome scale data will be key to advancing understanding, and in the case of parasites, developing new ways to control or cure diseases. The advent of second-generation sequencing technologies, improvements in computing algorithms and infrastructure and growth in bioinformatics and genomics literacy is making the addition of genome sequencing to the research goals of any nematode research program a less daunting prospect. To inspire, promote and coordinate genomic sequencing across the diversity of the phylum, we have launched a community wiki and the 959 Nematode Genomes initiative (www.nematodegenomes.org/). Just as the deciphering of the developmental lineage of the 959 cells of the adult hermaphrodite C. elegans was the gateway to broad advances in biomedical science, we hope that a nematode phylogeny with (at least) 959 sequenced species will underpin further advances in understanding the origins of parasitism, the dynamics of genomic change and the adaptations that have made Nematoda one of the most successful animal phyla.
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spelling pubmed-36701702013-09-19 Toward 959 nematode genomes Kumar, Sujai Koutsovoulos, Georgios Kaur, Gaganjot Blaxter, Mark Worm Review The sequencing of the complete genome of the nematode Caenorhabditis elegans was a landmark achievement and ushered in a new era of whole-organism, systems analyses of the biology of this powerful model organism. The success of the C. elegans genome sequencing project also inspired communities working on other organisms to approach genome sequencing of their species. The phylum Nematoda is rich and diverse and of interest to a wide range of research fields from basic biology through ecology and parasitic disease. For all these communities, it is now clear that access to genome scale data will be key to advancing understanding, and in the case of parasites, developing new ways to control or cure diseases. The advent of second-generation sequencing technologies, improvements in computing algorithms and infrastructure and growth in bioinformatics and genomics literacy is making the addition of genome sequencing to the research goals of any nematode research program a less daunting prospect. To inspire, promote and coordinate genomic sequencing across the diversity of the phylum, we have launched a community wiki and the 959 Nematode Genomes initiative (www.nematodegenomes.org/). Just as the deciphering of the developmental lineage of the 959 cells of the adult hermaphrodite C. elegans was the gateway to broad advances in biomedical science, we hope that a nematode phylogeny with (at least) 959 sequenced species will underpin further advances in understanding the origins of parasitism, the dynamics of genomic change and the adaptations that have made Nematoda one of the most successful animal phyla. Landes Bioscience 2012-01-01 /pmc/articles/PMC3670170/ /pubmed/24058822 http://dx.doi.org/10.4161/worm.19046 Text en Copyright © 2012 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Review
Kumar, Sujai
Koutsovoulos, Georgios
Kaur, Gaganjot
Blaxter, Mark
Toward 959 nematode genomes
title Toward 959 nematode genomes
title_full Toward 959 nematode genomes
title_fullStr Toward 959 nematode genomes
title_full_unstemmed Toward 959 nematode genomes
title_short Toward 959 nematode genomes
title_sort toward 959 nematode genomes
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3670170/
https://www.ncbi.nlm.nih.gov/pubmed/24058822
http://dx.doi.org/10.4161/worm.19046
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