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Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist

The intestine of Caenorhabditis elegans is derived from 20 cells that are organized into nine intestinal rings. During embryogenesis, three of the rings rotate approximately 90 degrees in a process known as intestinal twist. The underlying mechanisms for this morphological event are not fully known,...

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Autores principales: Pettersson, Sofia, Forchheimer, Robert, Larsson, Jan-Åke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Landes Bioscience 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3670462/
https://www.ncbi.nlm.nih.gov/pubmed/24058861
http://dx.doi.org/10.4161/worm.23701
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author Pettersson, Sofia
Forchheimer, Robert
Larsson, Jan-Åke
author_facet Pettersson, Sofia
Forchheimer, Robert
Larsson, Jan-Åke
author_sort Pettersson, Sofia
collection PubMed
description The intestine of Caenorhabditis elegans is derived from 20 cells that are organized into nine intestinal rings. During embryogenesis, three of the rings rotate approximately 90 degrees in a process known as intestinal twist. The underlying mechanisms for this morphological event are not fully known, but it has been demonstrated that both left-right and anterior-posterior asymmetry is required for intestinal twist to occur. We have recently presented a rule-based meta-Boolean tree model intended to describe complex lineages. In this report we apply this model to the E lineage of C. elegans, specifically targeting the asymmetric anterior-posterior division patterns within the lineage. The resulting model indicates that cells with the same factor concentration are located next to each other in the intestine regardless of lineage origin. In addition, the shift in factor concentrations coincides with the boundary for intestinal twist. When modeling lit-1 mutant data according to the same principle, the factor distributions in each cell are altered, yet the concurrence between the shift in concentration and intestinal twist remains. This pattern suggests that intestinal twist is controlled by a threshold mechanism. In the current paper we present the factor concentrations for all possible combinations of symmetric and asymmetric divisions in the E lineage and relate these to the potential threshold by studying existing data for wild-type and mutant embryos. Finally, we discuss how the resulting models can serve as a basis for experimental design in order to reveal the underlying mechanisms of intestinal twist.
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spelling pubmed-36704622013-09-19 Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist Pettersson, Sofia Forchheimer, Robert Larsson, Jan-Åke Worm Methods and Models The intestine of Caenorhabditis elegans is derived from 20 cells that are organized into nine intestinal rings. During embryogenesis, three of the rings rotate approximately 90 degrees in a process known as intestinal twist. The underlying mechanisms for this morphological event are not fully known, but it has been demonstrated that both left-right and anterior-posterior asymmetry is required for intestinal twist to occur. We have recently presented a rule-based meta-Boolean tree model intended to describe complex lineages. In this report we apply this model to the E lineage of C. elegans, specifically targeting the asymmetric anterior-posterior division patterns within the lineage. The resulting model indicates that cells with the same factor concentration are located next to each other in the intestine regardless of lineage origin. In addition, the shift in factor concentrations coincides with the boundary for intestinal twist. When modeling lit-1 mutant data according to the same principle, the factor distributions in each cell are altered, yet the concurrence between the shift in concentration and intestinal twist remains. This pattern suggests that intestinal twist is controlled by a threshold mechanism. In the current paper we present the factor concentrations for all possible combinations of symmetric and asymmetric divisions in the E lineage and relate these to the potential threshold by studying existing data for wild-type and mutant embryos. Finally, we discuss how the resulting models can serve as a basis for experimental design in order to reveal the underlying mechanisms of intestinal twist. Landes Bioscience 2013-01-01 2013-01-01 /pmc/articles/PMC3670462/ /pubmed/24058861 http://dx.doi.org/10.4161/worm.23701 Text en Copyright © 2013 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Methods and Models
Pettersson, Sofia
Forchheimer, Robert
Larsson, Jan-Åke
Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title_full Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title_fullStr Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title_full_unstemmed Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title_short Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage: Implications for the posterior boundary of intestinal twist
title_sort meta-boolean models of asymmetric division patterns in the c. elegans intestinal lineage: implications for the posterior boundary of intestinal twist
topic Methods and Models
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3670462/
https://www.ncbi.nlm.nih.gov/pubmed/24058861
http://dx.doi.org/10.4161/worm.23701
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