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Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits
Short-term synaptic plasticity is highly diverse across brain area, cortical layer, cell type, and developmental stage. Since short-term plasticity (STP) strongly shapes neural dynamics, this diversity suggests a specific and essential role in neural information processing. Therefore, a correct char...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674479/ https://www.ncbi.nlm.nih.gov/pubmed/23761760 http://dx.doi.org/10.3389/fncom.2013.00075 |
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author | Costa, Rui P. Sjöström, P. Jesper van Rossum, Mark C. W. |
author_facet | Costa, Rui P. Sjöström, P. Jesper van Rossum, Mark C. W. |
author_sort | Costa, Rui P. |
collection | PubMed |
description | Short-term synaptic plasticity is highly diverse across brain area, cortical layer, cell type, and developmental stage. Since short-term plasticity (STP) strongly shapes neural dynamics, this diversity suggests a specific and essential role in neural information processing. Therefore, a correct characterization of short-term synaptic plasticity is an important step towards understanding and modeling neural systems. Phenomenological models have been developed, but they are usually fitted to experimental data using least-mean-square methods. We demonstrate that for typical synaptic dynamics such fitting may give unreliable results. As a solution, we introduce a Bayesian formulation, which yields the posterior distribution over the model parameters given the data. First, we show that common STP protocols yield broad distributions over some model parameters. Using our result we propose a experimental protocol to more accurately determine synaptic dynamics parameters. Next, we infer the model parameters using experimental data from three different neocortical excitatory connection types. This reveals connection-specific distributions, which we use to classify synaptic dynamics. Our approach to demarcate connection-specific synaptic dynamics is an important improvement on the state of the art and reveals novel features from existing data. |
format | Online Article Text |
id | pubmed-3674479 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-36744792013-06-11 Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits Costa, Rui P. Sjöström, P. Jesper van Rossum, Mark C. W. Front Comput Neurosci Neuroscience Short-term synaptic plasticity is highly diverse across brain area, cortical layer, cell type, and developmental stage. Since short-term plasticity (STP) strongly shapes neural dynamics, this diversity suggests a specific and essential role in neural information processing. Therefore, a correct characterization of short-term synaptic plasticity is an important step towards understanding and modeling neural systems. Phenomenological models have been developed, but they are usually fitted to experimental data using least-mean-square methods. We demonstrate that for typical synaptic dynamics such fitting may give unreliable results. As a solution, we introduce a Bayesian formulation, which yields the posterior distribution over the model parameters given the data. First, we show that common STP protocols yield broad distributions over some model parameters. Using our result we propose a experimental protocol to more accurately determine synaptic dynamics parameters. Next, we infer the model parameters using experimental data from three different neocortical excitatory connection types. This reveals connection-specific distributions, which we use to classify synaptic dynamics. Our approach to demarcate connection-specific synaptic dynamics is an important improvement on the state of the art and reveals novel features from existing data. Frontiers Media S.A. 2013-06-06 /pmc/articles/PMC3674479/ /pubmed/23761760 http://dx.doi.org/10.3389/fncom.2013.00075 Text en Copyright © 2013 Costa, Sjöström and van Rossum. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc. |
spellingShingle | Neuroscience Costa, Rui P. Sjöström, P. Jesper van Rossum, Mark C. W. Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title | Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title_full | Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title_fullStr | Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title_full_unstemmed | Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title_short | Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
title_sort | probabilistic inference of short-term synaptic plasticity in neocortical microcircuits |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674479/ https://www.ncbi.nlm.nih.gov/pubmed/23761760 http://dx.doi.org/10.3389/fncom.2013.00075 |
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