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Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis
INTRODUCTION: Indirect immunofluorescence (IIF) employing ethanol-fixed neutrophils (ethN) is still the method of choice for assessing antineutrophil cytoplasmic antibodies (ANCA) in ANCA-associated vasculitides (AAV). However, conventional fluorescence microscopy is subjective and prone to high var...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674631/ https://www.ncbi.nlm.nih.gov/pubmed/23241527 http://dx.doi.org/10.1186/ar4119 |
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author | Knütter, Ilka Hiemann, Rico Brumma, Therese Büttner, Thomas Großmann, Kai Cusini, Marco Pregnolato, Francesca Borghi, Maria Orietta Anderer, Ursula Conrad, Karsten Reinhold, Dirk Roggenbuck, Dirk Csernok, Elena |
author_facet | Knütter, Ilka Hiemann, Rico Brumma, Therese Büttner, Thomas Großmann, Kai Cusini, Marco Pregnolato, Francesca Borghi, Maria Orietta Anderer, Ursula Conrad, Karsten Reinhold, Dirk Roggenbuck, Dirk Csernok, Elena |
author_sort | Knütter, Ilka |
collection | PubMed |
description | INTRODUCTION: Indirect immunofluorescence (IIF) employing ethanol-fixed neutrophils (ethN) is still the method of choice for assessing antineutrophil cytoplasmic antibodies (ANCA) in ANCA-associated vasculitides (AAV). However, conventional fluorescence microscopy is subjective and prone to high variability. The objective of this study was to evaluate novel pattern recognition algorithms for the standardized automated interpretation of ANCA patterns. METHODS: Seventy ANCA-positive samples (20 antimyeloperoxidase ANCA, 50 antiproteinase3 ANCA) and 100 controls from healthy individuals analyzed on ethN and formalin-fixed neutrophils (formN) by IIF were used as a 'training set' for the development of pattern recognition algorithms. Sera from 342 patients ('test set') with AAV and other systemic rheumatic and infectious diseases were tested for ANCA patterns using the novel pattern recognition algorithms and conventional fluorescence microscopy. RESULTS: Interpretation software employing pattern recognition algorithms was developed enabling positive/negative discrimination and classification of cytoplasmic ANCA (C-ANCA) and perinuclear ANCA (P-ANCA). Comparison of visual reading of the 'test set' samples with automated interpretation revealed Cohen's kappa (κ) values of 0.955 on ethN and 0.929 on formN for positive/negative discrimination. Analysis of the 'test set' with regard to the discrimination between C-ANCA and P-ANCA patterns showed a high agreement for ethN (κ = 0.746) and formN (κ = 0.847). There was no significant difference between visual and automated interpretation regarding positive/negative discrimination on ethN and formN, as well as ANCA pattern recognition (P > 0.05, respectively). CONCLUSIONS: Pattern recognition algorithms can assist in the automated interpretation of ANCA IIF. Automated reading of ethN and formN IIF patterns demonstrated high consistency with visual ANCA assessment. |
format | Online Article Text |
id | pubmed-3674631 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-36746312013-06-10 Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis Knütter, Ilka Hiemann, Rico Brumma, Therese Büttner, Thomas Großmann, Kai Cusini, Marco Pregnolato, Francesca Borghi, Maria Orietta Anderer, Ursula Conrad, Karsten Reinhold, Dirk Roggenbuck, Dirk Csernok, Elena Arthritis Res Ther Research Article INTRODUCTION: Indirect immunofluorescence (IIF) employing ethanol-fixed neutrophils (ethN) is still the method of choice for assessing antineutrophil cytoplasmic antibodies (ANCA) in ANCA-associated vasculitides (AAV). However, conventional fluorescence microscopy is subjective and prone to high variability. The objective of this study was to evaluate novel pattern recognition algorithms for the standardized automated interpretation of ANCA patterns. METHODS: Seventy ANCA-positive samples (20 antimyeloperoxidase ANCA, 50 antiproteinase3 ANCA) and 100 controls from healthy individuals analyzed on ethN and formalin-fixed neutrophils (formN) by IIF were used as a 'training set' for the development of pattern recognition algorithms. Sera from 342 patients ('test set') with AAV and other systemic rheumatic and infectious diseases were tested for ANCA patterns using the novel pattern recognition algorithms and conventional fluorescence microscopy. RESULTS: Interpretation software employing pattern recognition algorithms was developed enabling positive/negative discrimination and classification of cytoplasmic ANCA (C-ANCA) and perinuclear ANCA (P-ANCA). Comparison of visual reading of the 'test set' samples with automated interpretation revealed Cohen's kappa (κ) values of 0.955 on ethN and 0.929 on formN for positive/negative discrimination. Analysis of the 'test set' with regard to the discrimination between C-ANCA and P-ANCA patterns showed a high agreement for ethN (κ = 0.746) and formN (κ = 0.847). There was no significant difference between visual and automated interpretation regarding positive/negative discrimination on ethN and formN, as well as ANCA pattern recognition (P > 0.05, respectively). CONCLUSIONS: Pattern recognition algorithms can assist in the automated interpretation of ANCA IIF. Automated reading of ethN and formN IIF patterns demonstrated high consistency with visual ANCA assessment. BioMed Central 2012 2012-12-14 /pmc/articles/PMC3674631/ /pubmed/23241527 http://dx.doi.org/10.1186/ar4119 Text en Copyright ©2012 Knütter et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Knütter, Ilka Hiemann, Rico Brumma, Therese Büttner, Thomas Großmann, Kai Cusini, Marco Pregnolato, Francesca Borghi, Maria Orietta Anderer, Ursula Conrad, Karsten Reinhold, Dirk Roggenbuck, Dirk Csernok, Elena Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title | Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title_full | Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title_fullStr | Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title_full_unstemmed | Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title_short | Automated interpretation of ANCA patterns - a new approach in the serology of ANCA-associated vasculitis |
title_sort | automated interpretation of anca patterns - a new approach in the serology of anca-associated vasculitis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674631/ https://www.ncbi.nlm.nih.gov/pubmed/23241527 http://dx.doi.org/10.1186/ar4119 |
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