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Water-Protein Interactions: The Secret of Protein Dynamics
Water-protein interactions help to maintain flexible conformation conditions which are required for multifunctional protein recognition processes. The intimate relationship between the protein surface and hydration water can be analyzed by studying experimental water properties measured in protein s...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674730/ https://www.ncbi.nlm.nih.gov/pubmed/23766672 http://dx.doi.org/10.1155/2013/138916 |
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author | Martini, Silvia Bonechi, Claudia Foletti, Alberto Rossi, Claudio |
author_facet | Martini, Silvia Bonechi, Claudia Foletti, Alberto Rossi, Claudio |
author_sort | Martini, Silvia |
collection | PubMed |
description | Water-protein interactions help to maintain flexible conformation conditions which are required for multifunctional protein recognition processes. The intimate relationship between the protein surface and hydration water can be analyzed by studying experimental water properties measured in protein systems in solution. In particular, proteins in solution modify the structure and the dynamics of the bulk water at the solute-solvent interface. The ordering effects of proteins on hydration water are extended for several angstroms. In this paper we propose a method for analyzing the dynamical properties of the water molecules present in the hydration shells of proteins. The approach is based on the analysis of the effects of protein-solvent interactions on water protons NMR relaxation parameters. NMR relaxation parameters, especially the nonselective (R (1) (NS) ) and selective (R (1) (SE) ) spin-lattice relaxation rates of water protons, are useful for investigating the solvent dynamics at the macromolecule-solvent interfaces as well as the perturbation effects caused by the water-macromolecule interactions on the solvent dynamical properties. In this paper we demonstrate that Nuclear Magnetic Resonance Spectroscopy can be used to determine the dynamical contributions of proteins to the water molecules belonging to their hydration shells. |
format | Online Article Text |
id | pubmed-3674730 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-36747302013-06-13 Water-Protein Interactions: The Secret of Protein Dynamics Martini, Silvia Bonechi, Claudia Foletti, Alberto Rossi, Claudio ScientificWorldJournal Research Article Water-protein interactions help to maintain flexible conformation conditions which are required for multifunctional protein recognition processes. The intimate relationship between the protein surface and hydration water can be analyzed by studying experimental water properties measured in protein systems in solution. In particular, proteins in solution modify the structure and the dynamics of the bulk water at the solute-solvent interface. The ordering effects of proteins on hydration water are extended for several angstroms. In this paper we propose a method for analyzing the dynamical properties of the water molecules present in the hydration shells of proteins. The approach is based on the analysis of the effects of protein-solvent interactions on water protons NMR relaxation parameters. NMR relaxation parameters, especially the nonselective (R (1) (NS) ) and selective (R (1) (SE) ) spin-lattice relaxation rates of water protons, are useful for investigating the solvent dynamics at the macromolecule-solvent interfaces as well as the perturbation effects caused by the water-macromolecule interactions on the solvent dynamical properties. In this paper we demonstrate that Nuclear Magnetic Resonance Spectroscopy can be used to determine the dynamical contributions of proteins to the water molecules belonging to their hydration shells. Hindawi Publishing Corporation 2013-05-22 /pmc/articles/PMC3674730/ /pubmed/23766672 http://dx.doi.org/10.1155/2013/138916 Text en Copyright © 2013 Silvia Martini et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Martini, Silvia Bonechi, Claudia Foletti, Alberto Rossi, Claudio Water-Protein Interactions: The Secret of Protein Dynamics |
title | Water-Protein Interactions: The Secret of Protein Dynamics |
title_full | Water-Protein Interactions: The Secret of Protein Dynamics |
title_fullStr | Water-Protein Interactions: The Secret of Protein Dynamics |
title_full_unstemmed | Water-Protein Interactions: The Secret of Protein Dynamics |
title_short | Water-Protein Interactions: The Secret of Protein Dynamics |
title_sort | water-protein interactions: the secret of protein dynamics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3674730/ https://www.ncbi.nlm.nih.gov/pubmed/23766672 http://dx.doi.org/10.1155/2013/138916 |
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