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Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis

One of the remarkable features of networks is module that can provide useful insights into not only network organizations but also functional behaviors between their components. Comprehensive efforts have been devoted to investigating cohesive modules in the past decade. However, it is still not cle...

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Autores principales: Jiao, Qing-Ju, Huang, Yan, Liu, Wei, Wang, Xiao-Fan, Chen, Xiao-Shuang, Shen, Hong-Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3677904/
https://www.ncbi.nlm.nih.gov/pubmed/23762457
http://dx.doi.org/10.1371/journal.pone.0066020
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author Jiao, Qing-Ju
Huang, Yan
Liu, Wei
Wang, Xiao-Fan
Chen, Xiao-Shuang
Shen, Hong-Bin
author_facet Jiao, Qing-Ju
Huang, Yan
Liu, Wei
Wang, Xiao-Fan
Chen, Xiao-Shuang
Shen, Hong-Bin
author_sort Jiao, Qing-Ju
collection PubMed
description One of the remarkable features of networks is module that can provide useful insights into not only network organizations but also functional behaviors between their components. Comprehensive efforts have been devoted to investigating cohesive modules in the past decade. However, it is still not clear whether there are important structural characteristics of the nodes that do not belong to any cohesive module. In order to answer this question, we performed a large-scale analysis on 25 complex networks with different types and scales using our recently developed BTS (bintree seeking) algorithm, which is able to detect both cohesive and sparse modules in the network. Our results reveal that the sparse modules composed by the cohesively isolated nodes widely co-exist with the cohesive modules. Detailed analysis shows that both types of modules provide better characterization for the division of a network into functional units than merely cohesive modules, because the sparse modules possibly re-organize the nodes in the so-called cohesive modules, which lack obvious modular significance, into meaningful groups. Compared with cohesive modules, the sizes of sparse ones are generally smaller. Sparse modules are also found to have preferences in social and biological networks than others.
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spelling pubmed-36779042013-06-12 Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis Jiao, Qing-Ju Huang, Yan Liu, Wei Wang, Xiao-Fan Chen, Xiao-Shuang Shen, Hong-Bin PLoS One Research Article One of the remarkable features of networks is module that can provide useful insights into not only network organizations but also functional behaviors between their components. Comprehensive efforts have been devoted to investigating cohesive modules in the past decade. However, it is still not clear whether there are important structural characteristics of the nodes that do not belong to any cohesive module. In order to answer this question, we performed a large-scale analysis on 25 complex networks with different types and scales using our recently developed BTS (bintree seeking) algorithm, which is able to detect both cohesive and sparse modules in the network. Our results reveal that the sparse modules composed by the cohesively isolated nodes widely co-exist with the cohesive modules. Detailed analysis shows that both types of modules provide better characterization for the division of a network into functional units than merely cohesive modules, because the sparse modules possibly re-organize the nodes in the so-called cohesive modules, which lack obvious modular significance, into meaningful groups. Compared with cohesive modules, the sizes of sparse ones are generally smaller. Sparse modules are also found to have preferences in social and biological networks than others. Public Library of Science 2013-06-10 /pmc/articles/PMC3677904/ /pubmed/23762457 http://dx.doi.org/10.1371/journal.pone.0066020 Text en © 2013 Jiao et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Jiao, Qing-Ju
Huang, Yan
Liu, Wei
Wang, Xiao-Fan
Chen, Xiao-Shuang
Shen, Hong-Bin
Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title_full Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title_fullStr Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title_full_unstemmed Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title_short Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis
title_sort revealing the hidden relationship by sparse modules in complex networks with a large-scale analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3677904/
https://www.ncbi.nlm.nih.gov/pubmed/23762457
http://dx.doi.org/10.1371/journal.pone.0066020
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