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Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer

To identify novel genetic factors for colorectal cancer (CRC), we conducted a genome-wide association study in East Asians. By analyzing genome-wide data in 2,098 cases and 5,749 controls, we selected 64 promising SNPs for replication in an independent set of samples including up to 5,358 cases and...

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Autores principales: Jia, Wei-Hua, Zhang, Ben, Matsuo, Keitaro, Shin, Aesun, Xiang, Yong-Bing, Jee, Sun Ha, Kim, Dong-Hyun, Ren, Zefang, Cai, Qiuyin, Long, Jirong, Shi, Jiajun, Wen, Wanqing, Yang, Gong, Delahanty, Ryan J., Ji, Bu-Tian, Pan, Zhi-Zhong, Matsuda, Fumihiko, Gao, Yu-Tang, Oh, Jae Hwan, Ahn, Yoon-Ok, Park, Eun Jung, Li, Hong-Lan, Park, Ji Won, Jo, Jaeseong, Jeong, Jin-Young, Hosono, Satoyo, Casey, Graham, Peters, Ulrike, Shu, Xiao-Ou, Zeng, Yi-Xin, Zheng, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3679924/
https://www.ncbi.nlm.nih.gov/pubmed/23263487
http://dx.doi.org/10.1038/ng.2505
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author Jia, Wei-Hua
Zhang, Ben
Matsuo, Keitaro
Shin, Aesun
Xiang, Yong-Bing
Jee, Sun Ha
Kim, Dong-Hyun
Ren, Zefang
Cai, Qiuyin
Long, Jirong
Shi, Jiajun
Wen, Wanqing
Yang, Gong
Delahanty, Ryan J.
Ji, Bu-Tian
Pan, Zhi-Zhong
Matsuda, Fumihiko
Gao, Yu-Tang
Oh, Jae Hwan
Ahn, Yoon-Ok
Park, Eun Jung
Li, Hong-Lan
Park, Ji Won
Jo, Jaeseong
Jeong, Jin-Young
Hosono, Satoyo
Casey, Graham
Peters, Ulrike
Shu, Xiao-Ou
Zeng, Yi-Xin
Zheng, Wei
author_facet Jia, Wei-Hua
Zhang, Ben
Matsuo, Keitaro
Shin, Aesun
Xiang, Yong-Bing
Jee, Sun Ha
Kim, Dong-Hyun
Ren, Zefang
Cai, Qiuyin
Long, Jirong
Shi, Jiajun
Wen, Wanqing
Yang, Gong
Delahanty, Ryan J.
Ji, Bu-Tian
Pan, Zhi-Zhong
Matsuda, Fumihiko
Gao, Yu-Tang
Oh, Jae Hwan
Ahn, Yoon-Ok
Park, Eun Jung
Li, Hong-Lan
Park, Ji Won
Jo, Jaeseong
Jeong, Jin-Young
Hosono, Satoyo
Casey, Graham
Peters, Ulrike
Shu, Xiao-Ou
Zeng, Yi-Xin
Zheng, Wei
author_sort Jia, Wei-Hua
collection PubMed
description To identify novel genetic factors for colorectal cancer (CRC), we conducted a genome-wide association study in East Asians. By analyzing genome-wide data in 2,098 cases and 5,749 controls, we selected 64 promising SNPs for replication in an independent set of samples including up to 5,358 cases and 5,922 controls. We identified four SNPs with a P-value of 8.58 × 10(−7) to 3.77 × 10(−10) in the combined analysis of all East Asian samples. Three of the four SNPs were replicated in a study conducted among 26,060 European descendants with a combined P-value of 1.22 × 10(−10) for rs647161 (5q31.1), 6.64 × 10(−9) for rs2423279 (20p12.3), and 3.06 × 10(−8) for rs10774214 (12p13.32 near the CCND2 gene), respectively, derived from the meta-analysis of data from both East Asian and European populations. This study identified three new CRC susceptibility loci and provides additional insight into the genetics and biology of CRC.
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spelling pubmed-36799242013-08-01 Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer Jia, Wei-Hua Zhang, Ben Matsuo, Keitaro Shin, Aesun Xiang, Yong-Bing Jee, Sun Ha Kim, Dong-Hyun Ren, Zefang Cai, Qiuyin Long, Jirong Shi, Jiajun Wen, Wanqing Yang, Gong Delahanty, Ryan J. Ji, Bu-Tian Pan, Zhi-Zhong Matsuda, Fumihiko Gao, Yu-Tang Oh, Jae Hwan Ahn, Yoon-Ok Park, Eun Jung Li, Hong-Lan Park, Ji Won Jo, Jaeseong Jeong, Jin-Young Hosono, Satoyo Casey, Graham Peters, Ulrike Shu, Xiao-Ou Zeng, Yi-Xin Zheng, Wei Nat Genet Article To identify novel genetic factors for colorectal cancer (CRC), we conducted a genome-wide association study in East Asians. By analyzing genome-wide data in 2,098 cases and 5,749 controls, we selected 64 promising SNPs for replication in an independent set of samples including up to 5,358 cases and 5,922 controls. We identified four SNPs with a P-value of 8.58 × 10(−7) to 3.77 × 10(−10) in the combined analysis of all East Asian samples. Three of the four SNPs were replicated in a study conducted among 26,060 European descendants with a combined P-value of 1.22 × 10(−10) for rs647161 (5q31.1), 6.64 × 10(−9) for rs2423279 (20p12.3), and 3.06 × 10(−8) for rs10774214 (12p13.32 near the CCND2 gene), respectively, derived from the meta-analysis of data from both East Asian and European populations. This study identified three new CRC susceptibility loci and provides additional insight into the genetics and biology of CRC. 2012-12-23 2013-02 /pmc/articles/PMC3679924/ /pubmed/23263487 http://dx.doi.org/10.1038/ng.2505 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Jia, Wei-Hua
Zhang, Ben
Matsuo, Keitaro
Shin, Aesun
Xiang, Yong-Bing
Jee, Sun Ha
Kim, Dong-Hyun
Ren, Zefang
Cai, Qiuyin
Long, Jirong
Shi, Jiajun
Wen, Wanqing
Yang, Gong
Delahanty, Ryan J.
Ji, Bu-Tian
Pan, Zhi-Zhong
Matsuda, Fumihiko
Gao, Yu-Tang
Oh, Jae Hwan
Ahn, Yoon-Ok
Park, Eun Jung
Li, Hong-Lan
Park, Ji Won
Jo, Jaeseong
Jeong, Jin-Young
Hosono, Satoyo
Casey, Graham
Peters, Ulrike
Shu, Xiao-Ou
Zeng, Yi-Xin
Zheng, Wei
Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title_full Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title_fullStr Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title_full_unstemmed Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title_short Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
title_sort genome-wide association analyses in east asians identify new susceptibility loci for colorectal cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3679924/
https://www.ncbi.nlm.nih.gov/pubmed/23263487
http://dx.doi.org/10.1038/ng.2505
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