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Disk-based k-mer counting on a PC
BACKGROUND: The k-mer counting problem, which is to build the histogram of occurrences of every k-symbol long substring in a given text, is important for many bioinformatics applications. They include developing de Bruijn graph genome assemblers, fast multiple sequence alignment and repeat detection...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2013
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3680041/ https://www.ncbi.nlm.nih.gov/pubmed/23679007 http://dx.doi.org/10.1186/1471-2105-14-160 |