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Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681962/ https://www.ncbi.nlm.nih.gov/pubmed/23785502 http://dx.doi.org/10.1371/journal.pone.0066491 |
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author | Luo, Chao Wang, Xingyuan |
author_facet | Luo, Chao Wang, Xingyuan |
author_sort | Luo, Chao |
collection | PubMed |
description | A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors of systems are investigated. We provide a general formula of network transition matrices of ARBNs as well as a necessary and sufficient algebraic criterion to determine whether a group of given states compose an attractor of length[Image: see text] in ARBNs. Consequently, algorithms are achieved to find all of the attractors and basins in ARBNs. Examples are showed to demonstrate the feasibility of the proposed scheme. |
format | Online Article Text |
id | pubmed-3681962 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-36819622013-06-19 Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation Luo, Chao Wang, Xingyuan PLoS One Research Article A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors of systems are investigated. We provide a general formula of network transition matrices of ARBNs as well as a necessary and sufficient algebraic criterion to determine whether a group of given states compose an attractor of length[Image: see text] in ARBNs. Consequently, algorithms are achieved to find all of the attractors and basins in ARBNs. Examples are showed to demonstrate the feasibility of the proposed scheme. Public Library of Science 2013-06-13 /pmc/articles/PMC3681962/ /pubmed/23785502 http://dx.doi.org/10.1371/journal.pone.0066491 Text en © 2013 Luo and Wang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Luo, Chao Wang, Xingyuan Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title | Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title_full | Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title_fullStr | Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title_full_unstemmed | Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title_short | Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation |
title_sort | dynamics of random boolean networks under fully asynchronous stochastic update based on linear representation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681962/ https://www.ncbi.nlm.nih.gov/pubmed/23785502 http://dx.doi.org/10.1371/journal.pone.0066491 |
work_keys_str_mv | AT luochao dynamicsofrandombooleannetworksunderfullyasynchronousstochasticupdatebasedonlinearrepresentation AT wangxingyuan dynamicsofrandombooleannetworksunderfullyasynchronousstochasticupdatebasedonlinearrepresentation |