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Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation

A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors...

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Detalles Bibliográficos
Autores principales: Luo, Chao, Wang, Xingyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681962/
https://www.ncbi.nlm.nih.gov/pubmed/23785502
http://dx.doi.org/10.1371/journal.pone.0066491
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author Luo, Chao
Wang, Xingyuan
author_facet Luo, Chao
Wang, Xingyuan
author_sort Luo, Chao
collection PubMed
description A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors of systems are investigated. We provide a general formula of network transition matrices of ARBNs as well as a necessary and sufficient algebraic criterion to determine whether a group of given states compose an attractor of length[Image: see text] in ARBNs. Consequently, algorithms are achieved to find all of the attractors and basins in ARBNs. Examples are showed to demonstrate the feasibility of the proposed scheme.
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spelling pubmed-36819622013-06-19 Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation Luo, Chao Wang, Xingyuan PLoS One Research Article A novel algebraic approach is proposed to study dynamics of asynchronous random Boolean networks where a random number of nodes can be updated at each time step (ARBNs). In this article, the logical equations of ARBNs are converted into the discrete-time linear representation and dynamical behaviors of systems are investigated. We provide a general formula of network transition matrices of ARBNs as well as a necessary and sufficient algebraic criterion to determine whether a group of given states compose an attractor of length[Image: see text] in ARBNs. Consequently, algorithms are achieved to find all of the attractors and basins in ARBNs. Examples are showed to demonstrate the feasibility of the proposed scheme. Public Library of Science 2013-06-13 /pmc/articles/PMC3681962/ /pubmed/23785502 http://dx.doi.org/10.1371/journal.pone.0066491 Text en © 2013 Luo and Wang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Luo, Chao
Wang, Xingyuan
Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title_full Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title_fullStr Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title_full_unstemmed Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title_short Dynamics of Random Boolean Networks under Fully Asynchronous Stochastic Update Based on Linear Representation
title_sort dynamics of random boolean networks under fully asynchronous stochastic update based on linear representation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681962/
https://www.ncbi.nlm.nih.gov/pubmed/23785502
http://dx.doi.org/10.1371/journal.pone.0066491
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