Cargando…

Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition

Independent component analysis (ICA) can identify covarying functional networks in the resting brain. Despite its relatively widespread use, the potential of the temporal information (unlike spatial information) obtained by ICA from resting state fMRI (RS-fMRI) data is not always fully utilized. In...

Descripción completa

Detalles Bibliográficos
Autores principales: Tian, Lixia, Kong, Yazhuo, Ren, Juejing, Varoquaux, Gaël, Zang, Yufeng, Smith, Stephen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3688987/
https://www.ncbi.nlm.nih.gov/pubmed/23825545
http://dx.doi.org/10.1371/journal.pone.0066572
_version_ 1782274211597778944
author Tian, Lixia
Kong, Yazhuo
Ren, Juejing
Varoquaux, Gaël
Zang, Yufeng
Smith, Stephen M.
author_facet Tian, Lixia
Kong, Yazhuo
Ren, Juejing
Varoquaux, Gaël
Zang, Yufeng
Smith, Stephen M.
author_sort Tian, Lixia
collection PubMed
description Independent component analysis (ICA) can identify covarying functional networks in the resting brain. Despite its relatively widespread use, the potential of the temporal information (unlike spatial information) obtained by ICA from resting state fMRI (RS-fMRI) data is not always fully utilized. In this study, we systematically investigated which features in ICA of resting-state fMRI relate to behaviour, with stop signal reaction time (SSRT) in a stop-signal task taken as a test case. We did this by correlating SSRT with the following three kinds of measure obtained from RS-fMRI data: (1) the amplitude of each resting state network (RSN) (evaluated by the standard deviation of the RSN timeseries), (2) the temporal correlation between every pair of RSN timeseries, and (3) the spatial map of each RSN. For multiple networks, we found significant correlations not only between SSRT and spatial maps, but also between SSRT and network activity amplitude. Most of these correlations are of functional interpretability. The temporal correlations between RSN pairs were of functional significance, but these correlations did not appear to be very sensitive to finding SSRT correlations. In addition, we also investigated the effects of the decomposition dimension, spatial smoothing and Z-transformation of the spatial maps, as well as the techniques for evaluating the temporal correlation between RSN timeseries. Overall, the temporal information acquired by ICA enabled us to investigate brain function from a complementary perspective to the information provided by spatial maps.
format Online
Article
Text
id pubmed-3688987
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-36889872013-07-02 Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition Tian, Lixia Kong, Yazhuo Ren, Juejing Varoquaux, Gaël Zang, Yufeng Smith, Stephen M. PLoS One Research Article Independent component analysis (ICA) can identify covarying functional networks in the resting brain. Despite its relatively widespread use, the potential of the temporal information (unlike spatial information) obtained by ICA from resting state fMRI (RS-fMRI) data is not always fully utilized. In this study, we systematically investigated which features in ICA of resting-state fMRI relate to behaviour, with stop signal reaction time (SSRT) in a stop-signal task taken as a test case. We did this by correlating SSRT with the following three kinds of measure obtained from RS-fMRI data: (1) the amplitude of each resting state network (RSN) (evaluated by the standard deviation of the RSN timeseries), (2) the temporal correlation between every pair of RSN timeseries, and (3) the spatial map of each RSN. For multiple networks, we found significant correlations not only between SSRT and spatial maps, but also between SSRT and network activity amplitude. Most of these correlations are of functional interpretability. The temporal correlations between RSN pairs were of functional significance, but these correlations did not appear to be very sensitive to finding SSRT correlations. In addition, we also investigated the effects of the decomposition dimension, spatial smoothing and Z-transformation of the spatial maps, as well as the techniques for evaluating the temporal correlation between RSN timeseries. Overall, the temporal information acquired by ICA enabled us to investigate brain function from a complementary perspective to the information provided by spatial maps. Public Library of Science 2013-06-18 /pmc/articles/PMC3688987/ /pubmed/23825545 http://dx.doi.org/10.1371/journal.pone.0066572 Text en © 2013 Tian et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Tian, Lixia
Kong, Yazhuo
Ren, Juejing
Varoquaux, Gaël
Zang, Yufeng
Smith, Stephen M.
Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title_full Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title_fullStr Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title_full_unstemmed Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title_short Spatial vs. Temporal Features in ICA of Resting-State fMRI – A Quantitative and Qualitative Investigation in the Context of Response Inhibition
title_sort spatial vs. temporal features in ica of resting-state fmri – a quantitative and qualitative investigation in the context of response inhibition
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3688987/
https://www.ncbi.nlm.nih.gov/pubmed/23825545
http://dx.doi.org/10.1371/journal.pone.0066572
work_keys_str_mv AT tianlixia spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition
AT kongyazhuo spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition
AT renjuejing spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition
AT varoquauxgael spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition
AT zangyufeng spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition
AT smithstephenm spatialvstemporalfeaturesinicaofrestingstatefmriaquantitativeandqualitativeinvestigationinthecontextofresponseinhibition