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How good are my data and what is the resolution?

Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale...

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Detalles Bibliográficos
Autores principales: Evans, Philip R., Murshudov, Garib N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689523/
https://www.ncbi.nlm.nih.gov/pubmed/23793146
http://dx.doi.org/10.1107/S0907444913000061
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author Evans, Philip R.
Murshudov, Garib N.
author_facet Evans, Philip R.
Murshudov, Garib N.
author_sort Evans, Philip R.
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description Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale, averages measurements of symmetry-related reflections (using the symmetry determined previously) and produces many statistics that provide the first important measures of data quality. A new scaling program, AIMLESS, implements scaling models similar to those in SCALA but adds some additional analyses. From the analyses, a number of decisions can be made about the quality of the data and whether some measurements should be discarded. The effective ‘resolution’ of a data set is a difficult and possibly contentious question (particularly with referees of papers) and this is discussed in the light of tests comparing the data-processing statistics with trials of refinement against observed and simulated data, and automated model-building and comparison of maps calculated with different resolution limits. These trials show that adding weak high-resolution data beyond the commonly used limits may make some improvement and does no harm.
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spelling pubmed-36895232013-06-28 How good are my data and what is the resolution? Evans, Philip R. Murshudov, Garib N. Acta Crystallogr D Biol Crystallogr Research Papers Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale, averages measurements of symmetry-related reflections (using the symmetry determined previously) and produces many statistics that provide the first important measures of data quality. A new scaling program, AIMLESS, implements scaling models similar to those in SCALA but adds some additional analyses. From the analyses, a number of decisions can be made about the quality of the data and whether some measurements should be discarded. The effective ‘resolution’ of a data set is a difficult and possibly contentious question (particularly with referees of papers) and this is discussed in the light of tests comparing the data-processing statistics with trials of refinement against observed and simulated data, and automated model-building and comparison of maps calculated with different resolution limits. These trials show that adding weak high-resolution data beyond the commonly used limits may make some improvement and does no harm. International Union of Crystallography 2013-07-01 2013-06-13 /pmc/articles/PMC3689523/ /pubmed/23793146 http://dx.doi.org/10.1107/S0907444913000061 Text en © Evans & Murshudov 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Evans, Philip R.
Murshudov, Garib N.
How good are my data and what is the resolution?
title How good are my data and what is the resolution?
title_full How good are my data and what is the resolution?
title_fullStr How good are my data and what is the resolution?
title_full_unstemmed How good are my data and what is the resolution?
title_short How good are my data and what is the resolution?
title_sort how good are my data and what is the resolution?
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689523/
https://www.ncbi.nlm.nih.gov/pubmed/23793146
http://dx.doi.org/10.1107/S0907444913000061
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