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How good are my data and what is the resolution?
Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689523/ https://www.ncbi.nlm.nih.gov/pubmed/23793146 http://dx.doi.org/10.1107/S0907444913000061 |
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author | Evans, Philip R. Murshudov, Garib N. |
author_facet | Evans, Philip R. Murshudov, Garib N. |
author_sort | Evans, Philip R. |
collection | PubMed |
description | Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale, averages measurements of symmetry-related reflections (using the symmetry determined previously) and produces many statistics that provide the first important measures of data quality. A new scaling program, AIMLESS, implements scaling models similar to those in SCALA but adds some additional analyses. From the analyses, a number of decisions can be made about the quality of the data and whether some measurements should be discarded. The effective ‘resolution’ of a data set is a difficult and possibly contentious question (particularly with referees of papers) and this is discussed in the light of tests comparing the data-processing statistics with trials of refinement against observed and simulated data, and automated model-building and comparison of maps calculated with different resolution limits. These trials show that adding weak high-resolution data beyond the commonly used limits may make some improvement and does no harm. |
format | Online Article Text |
id | pubmed-3689523 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-36895232013-06-28 How good are my data and what is the resolution? Evans, Philip R. Murshudov, Garib N. Acta Crystallogr D Biol Crystallogr Research Papers Following integration of the observed diffraction spots, the process of ‘data reduction’ initially aims to determine the point-group symmetry of the data and the likely space group. This can be performed with the program POINTLESS. The scaling program then puts all the measurements on a common scale, averages measurements of symmetry-related reflections (using the symmetry determined previously) and produces many statistics that provide the first important measures of data quality. A new scaling program, AIMLESS, implements scaling models similar to those in SCALA but adds some additional analyses. From the analyses, a number of decisions can be made about the quality of the data and whether some measurements should be discarded. The effective ‘resolution’ of a data set is a difficult and possibly contentious question (particularly with referees of papers) and this is discussed in the light of tests comparing the data-processing statistics with trials of refinement against observed and simulated data, and automated model-building and comparison of maps calculated with different resolution limits. These trials show that adding weak high-resolution data beyond the commonly used limits may make some improvement and does no harm. International Union of Crystallography 2013-07-01 2013-06-13 /pmc/articles/PMC3689523/ /pubmed/23793146 http://dx.doi.org/10.1107/S0907444913000061 Text en © Evans & Murshudov 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Evans, Philip R. Murshudov, Garib N. How good are my data and what is the resolution? |
title | How good are my data and what is the resolution? |
title_full | How good are my data and what is the resolution? |
title_fullStr | How good are my data and what is the resolution? |
title_full_unstemmed | How good are my data and what is the resolution? |
title_short | How good are my data and what is the resolution? |
title_sort | how good are my data and what is the resolution? |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689523/ https://www.ncbi.nlm.nih.gov/pubmed/23793146 http://dx.doi.org/10.1107/S0907444913000061 |
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