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A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals
When protein crystals are submicrometre-sized, X-ray radiation damage precludes conventional diffraction data collection. For crystals that are of the order of 100 nm in size, at best only single-shot diffraction patterns can be collected and rotation data collection has not been possible, irrespect...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689525/ https://www.ncbi.nlm.nih.gov/pubmed/23793148 http://dx.doi.org/10.1107/S0907444913009700 |
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author | Nederlof, Igor van Genderen, Eric Li, Yao-Wang Abrahams, Jan Pieter |
author_facet | Nederlof, Igor van Genderen, Eric Li, Yao-Wang Abrahams, Jan Pieter |
author_sort | Nederlof, Igor |
collection | PubMed |
description | When protein crystals are submicrometre-sized, X-ray radiation damage precludes conventional diffraction data collection. For crystals that are of the order of 100 nm in size, at best only single-shot diffraction patterns can be collected and rotation data collection has not been possible, irrespective of the diffraction technique used. Here, it is shown that at a very low electron dose (at most 0.1 e(−) Å(−2)), a Medipix2 quantum area detector is sufficiently sensitive to allow the collection of a 30-frame rotation series of 200 keV electron-diffraction data from a single ∼100 nm thick protein crystal. A highly parallel 200 keV electron beam (λ = 0.025 Å) allowed observation of the curvature of the Ewald sphere at low resolution, indicating a combined mosaic spread/beam divergence of at most 0.4°. This result shows that volumes of crystal with low mosaicity can be pinpointed in electron diffraction. It is also shown that strategies and data-analysis software (MOSFLM and SCALA) from X-ray protein crystallography can be used in principle for analysing electron-diffraction data from three-dimensional nanocrystals of proteins. |
format | Online Article Text |
id | pubmed-3689525 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-36895252013-06-28 A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals Nederlof, Igor van Genderen, Eric Li, Yao-Wang Abrahams, Jan Pieter Acta Crystallogr D Biol Crystallogr Research Papers When protein crystals are submicrometre-sized, X-ray radiation damage precludes conventional diffraction data collection. For crystals that are of the order of 100 nm in size, at best only single-shot diffraction patterns can be collected and rotation data collection has not been possible, irrespective of the diffraction technique used. Here, it is shown that at a very low electron dose (at most 0.1 e(−) Å(−2)), a Medipix2 quantum area detector is sufficiently sensitive to allow the collection of a 30-frame rotation series of 200 keV electron-diffraction data from a single ∼100 nm thick protein crystal. A highly parallel 200 keV electron beam (λ = 0.025 Å) allowed observation of the curvature of the Ewald sphere at low resolution, indicating a combined mosaic spread/beam divergence of at most 0.4°. This result shows that volumes of crystal with low mosaicity can be pinpointed in electron diffraction. It is also shown that strategies and data-analysis software (MOSFLM and SCALA) from X-ray protein crystallography can be used in principle for analysing electron-diffraction data from three-dimensional nanocrystals of proteins. International Union of Crystallography 2013-07-01 2013-06-15 /pmc/articles/PMC3689525/ /pubmed/23793148 http://dx.doi.org/10.1107/S0907444913009700 Text en © Nederlof et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Nederlof, Igor van Genderen, Eric Li, Yao-Wang Abrahams, Jan Pieter A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title | A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title_full | A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title_fullStr | A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title_full_unstemmed | A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title_short | A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
title_sort | medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689525/ https://www.ncbi.nlm.nih.gov/pubmed/23793148 http://dx.doi.org/10.1107/S0907444913009700 |
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