Cargando…

Resequencing and Comparative Genomics of Stagonospora nodorum: Sectional Gene Absence and Effector Discovery

Stagonospora nodorum is an important wheat (Triticum aestivum) pathogen in many parts of the world, causing major yield losses. It was the first species in the large fungal Dothideomycete class to be genome sequenced. The reference genome sequence (SN15) has been instrumental in the discovery of gen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Syme, Robert Andrew, Hane, James K., Friesen, Timothy L., Oliver, Richard P.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Genetics Society of America 2013
Materias:	Investigations
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3689807/ https://www.ncbi.nlm.nih.gov/pubmed/23589517 http://dx.doi.org/10.1534/g3.112.004994

Ejemplares similares

The Cysteine Rich Necrotrophic Effector SnTox1 Produced by Stagonospora nodorum Triggers Susceptibility of Wheat Lines Harboring Snn1
por: Liu, Zhaohui, et al.
Publicado: (2012)

Characterising the Role of GABA and Its Metabolism in the Wheat Pathogen Stagonospora nodorum
por: Mead, Oliver, et al.
Publicado: (2013)

Interaction between the Bird Cherry-Oat Aphid (Rhopalosiphum padi) and Stagonospora Nodorum Blotch (Parastagonospora nodorum) on Wheat
por: Asalf, Belachew, et al.
Publicado: (2021)

Relationship between leaf stages and epistasis for resistance to Stagonospora nodorum in durum wheat
por: Bnejdi, Fethi, et al.
Publicado: (2012)

Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum
por: Bringans, Scott, et al.
Publicado: (2009)

A comparative analysis of the heterotrimeric G-protein Gα, Gβ and Gγ subunits in the wheat pathogen Stagonospora nodorum
por: Gummer, Joel P A, et al.
Publicado: (2012)

Induced biosyntheses of a novel butyrophenone and two aromatic polyketides in the plant pathogen Stagonospora nodorum
por: Yang, Xiao-Long, et al.
Publicado: (2013)

Ethylene-Cytokinin Interaction Determines Early Defense Response of Wheat against Stagonospora nodorum Berk.
por: Veselova, Svetlana V., et al.
Publicado: (2021)

Genome-wide association analysis permits characterization of Stagonospora nodorum blotch (SNB) resistance in hard winter wheat
por: AlTameemi, Rami, et al.
Publicado: (2021)

New Insights into the Roles of Host Gene-Necrotrophic Effector Interactions in Governing Susceptibility of Durum Wheat to Tan Spot and Septoria nodorum Blotch
por: Virdi, Simerjot K., et al.
Publicado: (2016)

Reactive Oxygen Species in Host Plant Are Required for an Early Defense Response against Attack of Stagonospora nodorum Berk. Necrotrophic Effectors SnTox
por: Veselova, Svetlana, et al.
Publicado: (2021)

Predicting Pre-planting Risk of Stagonospora nodorum blotch in Winter Wheat Using Machine Learning Models
por: Mehra, Lucky K., et al.
Publicado: (2016)

Pan-Parastagonospora Comparative Genome Analysis—Effector Prediction and Genome Evolution
por: Syme, Robert A, et al.
Publicado: (2018)

Mining and genomic characterization of resistance to tan spot, Stagonospora nodorum blotch (SNB), and Fusarium head blight in Watkins core collection of wheat landraces
por: Halder, Jyotirmoy, et al.
Publicado: (2019)

Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics
por: Syme, Robert A., et al.
Publicado: (2016)

Determining the order of resistance genes against Stagonospora nodorum blotch, Fusarium head blight and stem rust on wheat chromosome arm 3BS
por: Thapa, Rima, et al.
Publicado: (2016)

Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States
por: Richards, Jonathan K., et al.
Publicado: (2019)

Discovery of Lineage-Specific Genome Change in Rice Through Analysis of Resequencing Data
por: Arthur, Robert A., et al.
Publicado: (2018)

Reference Quality Genome Assemblies of Three Parastagonospora nodorum Isolates Differing in Virulence on Wheat
por: Richards, Jonathan K., et al.
Publicado: (2017)

Whole-Genome Resequencing Identifies the Molecular Genetic Cause for the Absence of a Gy5 Glycinin Protein in Soybean PI 603408
por: Gillman, Jason D., et al.
Publicado: (2017)

The Parastagonospora nodorum necrotrophic effector SnTox5 targets the wheat gene Snn5 and facilitates entry into the leaf mesophyll
por: Kariyawasam, Gayan K., et al.
Publicado: (2021)

A triple threat: the Parastagonospora nodorum SnTox267 effector exploits three distinct host genetic factors to cause disease in wheat
por: Richards, Jonathan K., et al.
Publicado: (2021)

Chromosome-level genome assembly and manually-curated proteome of model necrotroph Parastagonospora nodorum Sn15 reveals a genome-wide trove of candidate effector homologs, and redundancy of virulence-related functions within an accessory chromosome
por: Bertazzoni, Stefania, et al.
Publicado: (2021)

Development of INDEL Markers for Genetic Mapping Based on Whole Genome Resequencing in Soybean
por: Song, Xiaofeng, et al.
Publicado: (2015)

Genome Resequencing, Improvement of Variant Calling, and Population Genomic Analyses Provide Insights into the Seedlessness in the Genus Vitis
por: Kim, Myung-Shin, et al.
Publicado: (2020)

Genetic Mapping of Millions of SNPs in Safflower (Carthamus tinctorius L.) via Whole-Genome Resequencing
por: Bowers, John E., et al.
Publicado: (2016)

Genetic Diversity, Molecular Phylogeny, and Selection Evidence of Jinchuan Yak Revealed by Whole-Genome Resequencing
por: Lan, Daoliang, et al.
Publicado: (2018)

Assessing European Wheat Sensitivities to Parastagonospora nodorum Necrotrophic Effectors and Fine-Mapping the Snn3-B1 Locus Conferring Sensitivity to the Effector SnTox3
por: Downie, Rowena C., et al.
Publicado: (2018)

Utilizing Gene Tree Variation to Identify Candidate Effector Genes in Zymoseptoria tritici
por: McDonald, Megan C., et al.
Publicado: (2016)

Identification of Polymorphisms Associated with Drought Adaptation QTL in Brassica napus by Resequencing
por: Fletcher, Richard S., et al.
Publicado: (2016)

Role of Effector-Sensitivity Gene Interactions and Durability of Quantitative Resistance to Septoria Nodorum Blotch in Eastern U.S. Wheat
por: Cowger, Christina, et al.
Publicado: (2020)

Genetic Structure of the Norwegian Parastagonospora nodorum Population
por: Lin, Min, et al.
Publicado: (2020)

Genome-Wide Characterization of Lectin Receptor Kinases in Saccharum spontaneum L. and Their Responses to Stagonospora tainanensis Infection
por: Wang, Zhoutao, et al.
Publicado: (2021)

The First Telomere-to-Telomere Chromosome-Level Genome Assembly of Stagonospora tainanensis Causing Sugarcane Leaf Blight
por: Xu, Fu, et al.
Publicado: (2022)

GWAS analysis reveals distinct pathogenicity profiles of Australian Parastagonospora nodorum isolates and identification of marker-trait-associations to septoria nodorum blotch
por: Phan, Huyen T. T., et al.
Publicado: (2021)

Novel sources of resistance to Septoria nodorum blotch in the Vavilov wheat collection identified by genome-wide association studies
por: Phan, Huyen T. T., et al.
Publicado: (2018)

A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
por: Ellwood, Simon R, et al.
Publicado: (2010)

Integrating Rare-Variant Testing, Function Prediction, and Gene Network in Composite Resequencing-Based Genome-Wide Association Studies (CR-GWAS)
por: Zhu, Chengsong, et al.
Publicado: (2011)

Biparental Resequencing Coupled With SNP Genotyping of a Segregating Population Offers Insights Into the Landscape of Recombination and Fixed Genomic Regions in Elite Soybean
por: Li, Ying-hui, et al.
Publicado: (2014)

Comparison and Characterization of Mutations Induced by Gamma-Ray and Carbon-Ion Irradiation in Rice (Oryza sativa L.) Using Whole-Genome Resequencing
por: Li, Feng, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_iilu1g7bojnc38pa6kko6lo5ro