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eFG: an electronic resource for Fusarium graminearum
Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficien...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3690120/ https://www.ncbi.nlm.nih.gov/pubmed/23798489 http://dx.doi.org/10.1093/database/bat042 |
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author | Liu, Xiaoping Zhang, Xiaodong Tang, Wei-Hua Chen, Luonan Zhao, Xing-Ming |
author_facet | Liu, Xiaoping Zhang, Xiaodong Tang, Wei-Hua Chen, Luonan Zhao, Xing-Ming |
author_sort | Liu, Xiaoping |
collection | PubMed |
description | Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficient strategies to combat this destructive fungus. Unfortunately, most available molecular data related to F. graminearum are distributed in various media, where each single source only provides limited information on the complex biological systems of the fungus. In this work, we present a comprehensive database, namely eFG (Electronic resource for Fusarium graminearum), to the community for further understanding this destructive pathogen. In particular, a large amount of functional genomics data generated by our group is deposited in eFG, including protein subcellular localizations, protein–protein interactions and orthologous genes in other model organisms. This valuable knowledge can not only help to disclose the molecular underpinnings of pathogenesis of the destructive fungus F. graminearum but also help the community to develop efficient strategies to combat this pathogen. To our best knowledge, eFG is the most comprehensive functional genomics database for F. graminearum until now. The eFG database is freely accessible at http://csb.shu.edu.cn/efg/ with a user-friendly and interactive interface, and all data can be downloaded freely. Database URL: http://csb.shu.edu.cn/efg/ |
format | Online Article Text |
id | pubmed-3690120 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-36901202013-06-24 eFG: an electronic resource for Fusarium graminearum Liu, Xiaoping Zhang, Xiaodong Tang, Wei-Hua Chen, Luonan Zhao, Xing-Ming Database (Oxford) Database Tool Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficient strategies to combat this destructive fungus. Unfortunately, most available molecular data related to F. graminearum are distributed in various media, where each single source only provides limited information on the complex biological systems of the fungus. In this work, we present a comprehensive database, namely eFG (Electronic resource for Fusarium graminearum), to the community for further understanding this destructive pathogen. In particular, a large amount of functional genomics data generated by our group is deposited in eFG, including protein subcellular localizations, protein–protein interactions and orthologous genes in other model organisms. This valuable knowledge can not only help to disclose the molecular underpinnings of pathogenesis of the destructive fungus F. graminearum but also help the community to develop efficient strategies to combat this pathogen. To our best knowledge, eFG is the most comprehensive functional genomics database for F. graminearum until now. The eFG database is freely accessible at http://csb.shu.edu.cn/efg/ with a user-friendly and interactive interface, and all data can be downloaded freely. Database URL: http://csb.shu.edu.cn/efg/ Oxford University Press 2013-06-22 /pmc/articles/PMC3690120/ /pubmed/23798489 http://dx.doi.org/10.1093/database/bat042 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Tool Liu, Xiaoping Zhang, Xiaodong Tang, Wei-Hua Chen, Luonan Zhao, Xing-Ming eFG: an electronic resource for Fusarium graminearum |
title | eFG: an electronic resource for Fusarium graminearum |
title_full | eFG: an electronic resource for Fusarium graminearum |
title_fullStr | eFG: an electronic resource for Fusarium graminearum |
title_full_unstemmed | eFG: an electronic resource for Fusarium graminearum |
title_short | eFG: an electronic resource for Fusarium graminearum |
title_sort | efg: an electronic resource for fusarium graminearum |
topic | Database Tool |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3690120/ https://www.ncbi.nlm.nih.gov/pubmed/23798489 http://dx.doi.org/10.1093/database/bat042 |
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