Cargando…

eFG: an electronic resource for Fusarium graminearum

Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficien...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Xiaoping, Zhang, Xiaodong, Tang, Wei-Hua, Chen, Luonan, Zhao, Xing-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3690120/
https://www.ncbi.nlm.nih.gov/pubmed/23798489
http://dx.doi.org/10.1093/database/bat042
_version_ 1782274349227573248
author Liu, Xiaoping
Zhang, Xiaodong
Tang, Wei-Hua
Chen, Luonan
Zhao, Xing-Ming
author_facet Liu, Xiaoping
Zhang, Xiaodong
Tang, Wei-Hua
Chen, Luonan
Zhao, Xing-Ming
author_sort Liu, Xiaoping
collection PubMed
description Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficient strategies to combat this destructive fungus. Unfortunately, most available molecular data related to F. graminearum are distributed in various media, where each single source only provides limited information on the complex biological systems of the fungus. In this work, we present a comprehensive database, namely eFG (Electronic resource for Fusarium graminearum), to the community for further understanding this destructive pathogen. In particular, a large amount of functional genomics data generated by our group is deposited in eFG, including protein subcellular localizations, protein–protein interactions and orthologous genes in other model organisms. This valuable knowledge can not only help to disclose the molecular underpinnings of pathogenesis of the destructive fungus F. graminearum but also help the community to develop efficient strategies to combat this pathogen. To our best knowledge, eFG is the most comprehensive functional genomics database for F. graminearum until now. The eFG database is freely accessible at http://csb.shu.edu.cn/efg/ with a user-friendly and interactive interface, and all data can be downloaded freely. Database URL: http://csb.shu.edu.cn/efg/
format Online
Article
Text
id pubmed-3690120
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-36901202013-06-24 eFG: an electronic resource for Fusarium graminearum Liu, Xiaoping Zhang, Xiaodong Tang, Wei-Hua Chen, Luonan Zhao, Xing-Ming Database (Oxford) Database Tool Fusarium graminearum is a plant pathogen, which causes crop diseases and further leads to huge economic damage worldwide in past decades. Recently, the accumulation of different types of molecular data provides insights into the pathogenic mechanism of F. graminearum, and might help develop efficient strategies to combat this destructive fungus. Unfortunately, most available molecular data related to F. graminearum are distributed in various media, where each single source only provides limited information on the complex biological systems of the fungus. In this work, we present a comprehensive database, namely eFG (Electronic resource for Fusarium graminearum), to the community for further understanding this destructive pathogen. In particular, a large amount of functional genomics data generated by our group is deposited in eFG, including protein subcellular localizations, protein–protein interactions and orthologous genes in other model organisms. This valuable knowledge can not only help to disclose the molecular underpinnings of pathogenesis of the destructive fungus F. graminearum but also help the community to develop efficient strategies to combat this pathogen. To our best knowledge, eFG is the most comprehensive functional genomics database for F. graminearum until now. The eFG database is freely accessible at http://csb.shu.edu.cn/efg/ with a user-friendly and interactive interface, and all data can be downloaded freely. Database URL: http://csb.shu.edu.cn/efg/ Oxford University Press 2013-06-22 /pmc/articles/PMC3690120/ /pubmed/23798489 http://dx.doi.org/10.1093/database/bat042 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Tool
Liu, Xiaoping
Zhang, Xiaodong
Tang, Wei-Hua
Chen, Luonan
Zhao, Xing-Ming
eFG: an electronic resource for Fusarium graminearum
title eFG: an electronic resource for Fusarium graminearum
title_full eFG: an electronic resource for Fusarium graminearum
title_fullStr eFG: an electronic resource for Fusarium graminearum
title_full_unstemmed eFG: an electronic resource for Fusarium graminearum
title_short eFG: an electronic resource for Fusarium graminearum
title_sort efg: an electronic resource for fusarium graminearum
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3690120/
https://www.ncbi.nlm.nih.gov/pubmed/23798489
http://dx.doi.org/10.1093/database/bat042
work_keys_str_mv AT liuxiaoping efganelectronicresourceforfusariumgraminearum
AT zhangxiaodong efganelectronicresourceforfusariumgraminearum
AT tangweihua efganelectronicresourceforfusariumgraminearum
AT chenluonan efganelectronicresourceforfusariumgraminearum
AT zhaoxingming efganelectronicresourceforfusariumgraminearum